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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NDB2_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.35
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNFSVFERF SKAFKDHPSL TRILVVSTIS GGGLIAYSEA NASYGANGGA VVETGTKKKK  60
   61 VVLLGTGWAG TSFLKNLNNS QYEVQIISPR NYFAFTPLLP SVTCGTVEAR SVVEPIRNIG 120
  121 RKNVDTSYLE AECFKIDPAS KKVYCRSKQG LSSNGKKEFS VDYDYLVIAT GAQSNTFNIP 180
  181 GVEENCHFLK EVEDAQRIRK TVIDSFEKAS LPELSDEERK RILHFVVVGG GPTGVEFAAE 240
  241 LHDFVTEDLV SLYPRAKGSV RITLLEAADH ILTMFDKRIT EFAEEKFSRD GIDVKLGSMV 300
  301 TKVNEKDISA KTKGGEVSSI PYGMIVWSTG IGTRPVIKDF MKQIGQGNRR ALATDEWLRV 360
  361 EGTDNIYALG DCATINQRKV MEDVSAIFSK ADKDKSGTLT LKEFQEAMDD ICVRYPQVEL 420
  421 YLKSKRMRGI ADLLKEAETD DVSKNNIELK IEEFKSALSQ VDSQVKFLPA TAQVAAQQGA 480
  481 YLAKCFDRME ECEKSPEGPI RMRGEGRHRF RPFRYRHLGQ FAPLGGEQTA AQLPGDWVSI 540
  541 GHSSQWLWYS VYASKQVSWR TRVLVVSDWM RRFIFGRDSS SI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle