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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AIR3_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLTHNFSFL LLLLLVHMSS KHILASKDSS SYVVYFGAHS HVGEITEDAM DRVKETHYDF  60
   61 LGSFTGSRER ATDAIFYSYT KHINGFAAHL DHDLAYEISK HPEVVSVFPN KALKLHTTRS 120
  121 WDFLGLEHNS YVPSSSIWRK ARFGEDTIIA NLDTGVWPES KSFRDEGLGP IPSRWKGICQ 180
  181 NQKDATFHCN RKLIGARYFN KGYAAAVGHL NSSFDSPRDL DGHGSHTLST AAGDFVPGVS 240
  241 IFGQGNGTAK GGSPRARVAA YKVCWPPVKG NECYDADVLA AFDAAIHDGA DVISVSLGGE 300
  301 PTSFFNDSVA IGSFHAAKKR IVVVCSAGNS GPADSTVSNV APWQITVGAS TMDREFASNL 360
  361 VLGNGKHYKG QSLSSTALPH AKFYPIMASV NAKAKNASAL DAQLCKLGSL DPIKTKGKIL 420
  421 VCLRGQNGRV EKGRAVALGG GIGMVLENTY VTGNDLLADP HVLPATQLTS KDSFAVSRYI 480
  481 SQTKKPIAHI TPSRTDLGLK PAPVMASFSS KGPSIVAPQI LKPDITAPGV SVIAAYTGAV 540
  541 SPTNEQFDPR RLLFNAISGT SMSCPHISGI AGLLKTRYPS WSPAAIRSAI MTTATIMDDI 600
  601 PGPIQNATNM KATPFSFGAG HVQPNLAVNP GLVYDLGIKD YLNFLCSLGY NASQISVFSG 660
  661 NNFTCSSPKI SLVNLNYPSI TVPNLTSSKV TVSRTVKNVG RPSMYTVKVN NPQGVYVAVK 720
  721 PTSLNFTKVG EQKTFKVILV KSKGNVAKGY VFGELVWSDK KHRVRSPIVV KL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle