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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4972776
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNGDILGYK IYYLVTYSPQ ALEPGRKWEE EIEVVSATAT SHSLVFLDKF TEYRIQLLAF  60
   61 NPAGDGPRSA PITVKTLPGV PSAPLHLRFS DITMQSLEVT WDPPKFLNGE ILGYLVTYET 120
  121 TEENEKFSKQ VKQKVSNTTL RVQNLEEEVT YTFTVRAQTS VDYGPGISEN VTTGPQDGSP 180
  181 VAPRDLILTK TLSSVEMHWI NGPSGRGPIL GYLIEAKKRD DSRWTKIEQT RKGMMQDFTV 240
  241 SYHILMPSTA YTFRVIAYNR YGISFPVYSK DSILTPSKLH LEYGYLQHKP FYRQTWFMVS 300
  301 LAATSIVIIV MVIAVLCVKS KSYKYKQEAQ KTLEESMAMS IDERQELALE LYRSRHGVGT 360
  361 GTLNSVGTLR SGTLGTLGRK STSRPPPGVH LGKSPPRPSP ASVAYHSDEE SLKCYDENPD 420
  421 DSSVTEKPSE VSSSEASQHS ESENESVRSD PHSFVNHYAN VNDSLRQSWK KTKPVRNYSS 480
  481 YTDSEPEGSA VMSLNGGQII VNNMARSRAP LPGFSSFV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle