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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4106519
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRRASYCAG HAFTSLTVVG SRRFFQGERC EAEIVKLTKE RGMFSDASVE ASVHQLMSRL  60
   61 SDSPYVRHYT DAEVSAHAHG FLCAKARSAL GEPFEHFHES DDSAFYICRK DQASQLRAVR 120
  121 QLTKFVSRER ETKQSVSVRC YTAGDSDIAV FTAKIRPFVN PNPEKGETDI GQLASSAFLE 180
  181 ERSPEMQERY QDLINRFHES VVPVHTVREV DGEVCFSMIM AADRSYYIAT LQTVIQEIPG 240
  241 AVVTRCFSET FSNDTHVYTY FVRGATSQQL SDRASLVPFL PTRPRSLITR LHEDMVFDTE 300
  301 QTVYTDAAVI RLLLTPQPTS EDYRHLRSLV SKEPNGLSRL NNLRTTLSLE MMSERYILTL 360
  361 ISTYPEFMKE IYEDFQVGTT HERRCAIREK ITTRFREDQR SEHDLGIFNA FLQFNEVVLK 420
  421 HNFFKQHKVA LCFRLDPSFL RSLGYPRVPH GVFLLAGAQW RGFHVRFTDI ARGAVRMIFS 480
  481 KDTMYRRNKR SVFQENYNLA LTQLLKNKDI PEGGSKGTIL VSSRYLNTFN QPLCERIFLQ 540
  541 YADALLDVVI PGEEGIVDRL KTPEIIFLGP DEHTAGTFPS VGSLFSKKRG YSAWKSFTTG 600
  601 KDASLGGIPT TILIAMTTRS VRTMVRGVYE KLGLDEASQT KFLTGGPDGD LGSNEILLSK 660
  661 EKTLAVLDIS ASLFDPEGLN KEELKRLATA RKQLRDFDKS KLSSKGFLVL TGDKNVTLPD 720
  721 GTHVSDGVSF RDEFHLTKYS AADVFVPCGG RPRSVTLANV GRFLNLSAAD NDSLLAGGSI 780
  781 QLKTPKYKII VEGANLFISQ DARLAIERCG IVLIKDASAN KGGVTSSSLE VYAGVALSDE 840
  841 EHAQHMCVKD PNNVPEFYKK YVLDIIERIE SNARREFEAI WREQQVQEGM PKTLIADSLS 900
  901 EKNVRVRASI LSSDMCENKE LVRYVLSNYT PKTLLEVVPL ETLMERVPLE YQKAICAMWL 960
  961 ASEYVYTTGI SGNEFDFFTF MTKHMEQAKH IS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle