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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|22506643
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.79
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRATLTSLLV SITFLVSLVA AETHTWYFKT GWVNANPDGV YERPMIGFND TWPLPTLRVK  60
   61 KGDRVQLYLI NGFDNLNTTL HFHGLFQNGT NQMDGPEMVT QCPIPPGETY LYNFTVDQVG 120
  121 TYWYHSHTAG QYGDGMRGVF VIDDDDFPYD YDEDVVLTVG DHYHKYSSDI IPSFLSRFNP 180
  181 TGAEPIPQNF LFNETRNLTW KVEPGKTYLV RIVNVGGFVS QYLWMEDHEF TVVEVDGIYV 240
  241 EKNTTDMLYI TTAQRYSVLI NTKNSTDKNY AFMQRVDTDM LDVIPSDLQL NGTNYIVYNE 300
  301 DASLPEAYDV DSLDNYLDDF YLKPLSKEKL LDDADYTITV DVQMDNLGNG VNYAFFNNIT 360
  361 YTTPKVPTLL TVLSAGDAAT NELVYGTNTN SFVLQGGDVV DIVLNNLDTG KHPFHLHGHA 420
  421 FQLIERHKEI PEGEDPVTYN ATDHADWPEY PMVRDTVYVR PQSYIVMRFK ADNPGVWFFH 480
  481 CHIEWHLEQG LAFQLIEDPQ GIQKNEKITD NHKQICEKVG VPWEGNAAAN SKDYLNLVGE 540
  541 NVQVKRLPTG FTAKGIVALV FSCISAFLGL AAISYYDMND IENMEKRVAR DLDVYFDDDD 600
  601 DEEEEEEQSI TEQAATGSSS SPSNK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle