YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22122030
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKPLLVLSA LALGISSVVT PMTATAALPT AVNNQQVPSL APMLEQVTPA VVSIAVEGKH  60
   61 VSKQRLPEAY RFFFGPDFPT EQVREQPFRG LGSGVIIDAK KGYVVTNNHV IDGADTIKVQ 120
  121 LSDGREIKAK LLGTDKMSDI ALLQLEDAKD LTAIKLADSD NLRVGDFAVA IGNPFGLGQT 180
  181 VTSGIVSALG RSGLNIENFE NFIQTDAPIN SGNSGGALVN LNGELIGINT AILAPNGGNV 240
  241 GIGFAIPANM VKNLTDQLIE FGQVKRGVLG VTGGELTSEL AETFGYKTNH GAFVNQVLPE 300
  301 GSAAKAGLKA GDIIVSVNNK PIRTFSELRA KIVTLGAGKK VTLGLIRDGK ELNVPVTLEA 360
  361 AKQTQVKADD LHESLAGAEF ANTSPEDKVH GVKVTELNKQ SIAARYGLKK GDIIIGLNRQ 420
  421 PIKNLGELRK ALEKKPNVLA MEVKRGDSVL YLIMR

Type	Start	End	Confidence
Signal Peptide	1	26	0.99
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	455	0.99