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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7511988, gi|4...
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFVLSVLLI AILKDKYDYW LPSRTGCQTL AANIWSDKTT AQNEPINLTN ANAPIKNAKN  60
   61 LNSTITNVAA FDTKLNHLLV DTITGRVFVG GVNRLYQLSP DLELSETVKT GPQNDSVECS 120
  121 ILDCPLNAVR SPTDNYNKVL LIDRATSRLI ACGSLFQGTC TVRNLQNVSI IEHEVPDAVV 180
  181 ANDANSSTVA FIAPGPPQHP VTNVMYVGVT YTNNSPYRSE IPAVASRSLE KTKMFQIASS 240
  241 AVTTGTRTFI NSYARETYFV NYVYGFSSER FSYFLTTQLK HSHHSSPKEY ITKLVRICQE 300
  301 DSNYYSYTEI PVECISDAQG GTKFNLVQAG FLGKPSSNLA QSLGISIQND VLFAVFSKGE 360
  361 GNTPTNNSAL CIYSLKSIRR KFMQNIKSCF NGSGMRGLNF ISPSMPCVLT KLQTIGEDFC 420
  421 GLDVNSPLGG ETPITSVPVA MFNTKLTSVA ATSTSGYTVV FVGTSDGFLK KVVIESSSIA 480
  481 NEYASFAVDL GSEINRDMQF DNQNLYIYVM SKTKVSKVKV FDCSDYKTCG DCLGARDPYC 540
  541 GWCSLENKCS PRSNCQDDAN DPFYWVSYKT GKCTTITSVV PHQLQRTTAR TLELIIDHLP 600
  601 QLKENLICAF TTEDKALFTN ATKKRNGVNC TTPRTDMLPQ IEQGKHHFTA KLSVRTRNGP 660
  661 DLVSTDFTFF DCSTHSSCTR CVSSEFPCDW CVEAHRCTHD TAENCRNDIL VTGVSRIGPS 720
  721 YRSGPGFCPT INATGDGSEV LVAGGTSKSI KVKVHIIGQF IVQTRFVCQF NIEGRVTSLN 780
  781 AQLLGDTIYC DSMEFQYTSR SPNLTATFAV IWGGSKPLDN PHNIHVVIYR CREMADSCGI 840
  841 CLALSEKYNC GWCSSTNTCE VEEQCNKNKE GKTDWLNRSE ICPNPEIHTF QPKTGPWEGG 900
  901 TNITIRGINL GKNYNDIYSG VRIAGINCMP FPQFYIDTKQ IVCTVDSPGE QMYRNGKIVV 960
  961 QIGDYRGESK EDYEFVDPKI LDFNPKFGPT SGGTEIHITG KHLNAGSRIQ ASINDHLPCK1020
 1021 ILSTDSSQAI CRTSASPGII EGRLKMSFDN GPREFNDYNF KYVLDPTVEH VSSGPSGQIK1080
 1081 VPKGIPAGGI RISVTGTQFT SIQNPNIYVV YNGEMYASPC RVQSDTEMEC ASPVVDVDSH1140
 1141 VIEAERPILL EYGFLMDNVL RVQNLSKVHN NHFELYPNPE YFIFEERVKY FKSXYLTING1200
 1201 RNLDRACKES DVEVKIGNGF CNITSLSRQQ LTCRPPSEAT ATKSMNGPEV IVRIGTSLEY1260
 1261 RIGILSYESS NIILDWGENV IFAVIATIVI LLLIFVALLV AYKKKSSESS RVLRNMQEQM1320
 1321 DILELRVAAE CKEAFAELQT EMTDLTGDLT SGGIPFLDYR SYAMKILFPN HEDHIVLQWE1380
 1381 RPELLRKEKG LRIFGQLIMN KTFLLLFIRT LESNRYFSMR ERVNVASLIM VTLQSKLEYC1440
 1441 TDILKTLLGD LIEKCIEGKS HPKLLLRRTE SVAEKMLSAW FTFLLYKFLK ECAGEPLYML1500
 1501 FRAVKGQVDK GPVDACTHEA RYSLSEEKLI RQSIDFRPMN VYASIIQQPI FCNNLDMLPS1560
 1561 HTENVSVKVL DCDTIGQVKE KCLETIYRNI PSSPRPPKDD LDLEWRTGAT GRVILYDEDV1620
 1621 TSKTESEWKK LNTLQHYNVP DGAGLSLVPK QSSIYNFSIL SDKNEKSHKY ETLNISKYTS1680
 1681 SSPTFSRAGS PLNNDMHENG LRYWHLVKHH DSDMQKEGER VNKLVSEIYL TRLLATKGTL1740
 1741 QKFVDDLFET IFSTAHRGSA LPLAIKYMFD FLDDQAQLHG ITDPEVVHTW KSNSLPLRFW1800
 1801 VNLIKNPNFV FDIHKSNIVD SCLSVVAQTF MDSCSTSDHR LGKDSPSSKL LYAKDIPEYR1860
 1861 KWVDRYYRDI RDMSPISDQD MNAMLAEESR LHTTEFNTNC ALHELYTYAV KYNEQLTVTL1920
 1921 EEDEFSQKQR LAFKLEQVHN IMSSE

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