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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4100305
Protein type: Globular with Signal Peptide
Type Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKGFYISKP VGILAILLGV AAVCTIIALS VVYSQEKNRS TESSTAASTA APTGPTTTVA  60
   61 TTLDQSKPWN VYRLPKTLIP DSYNVTLRPY LTPNNKGLYV FTGTSIVRFT CKESTNIVII 120
  121 HSKRLNYTSH QGHMVALSGV GGFQPQPVIV RTELVELTEY LVVHLQEPLV AGRQYEMKSE 180
  181 FQGELADDLA GFYRSEYMEN GVKKVLATTH MQATDARKSF PCFDEPAMKA TFNITTIHPN 240
  241 NLVALSNMLP RGPSVPFEDP TWKVTEFETT PIMSTYLLAY IVSEFSYVET RAPSGVLIRI 300
  301 WARPSAINQG HGDYALKVTG PILDFFSQHY DTPYPLNKSD QIALPDFNAG AMENWGLVTY 360
  361 RESALLYDRQ SSSSGNQERV VTVIAHELAH QWFGNLVTLE WWNDLWLNEG FASYVEYLGA 420
  421 DFAEPTWNLK DLMVLNDVYR VMAVDALASS HPLSTPASEI NTPAQISEVF DSISYSKGAS 480
  481 VLRMLSNFLT EDLFKMGIAS YLHTYKYGNT IYLNLWEHLQ QVVDKQPTIK LPDTVSAIMD 540
  541 RWILQMGFPV ITVDTQTGTI SQQHFLLDPQ SVVTRPSQFK YLWIVPISSV RNGSPQAHYW 600
  601 LPGVEKAQND LFKTTANDWV LVNLNVTGYY LVNYDNENWK KIQTQLQTDL SVIPVINRAQ 660
  661 VIHDAFNLAS AQKVPVTLAL NNTLFLIQET EYMPWQAALS SLSYFKLMFD RSEVYGPMKR 720
  721 YLKKQVTPSF NHFRKSTKNW TDHPQALMDQ YSEINAVSTA CSYGVPECEK LAATLFAQWK 780
  781 KNPQNNPIHP NLRSTVYCNA IAQGGEEEWN FVWEQFLKAE LVNEADKFRG ALACSNQVWI 840
  841 LNRFLSYTLD PNLIRKQDVT STLSSISSNV VGQTLVWDFV QSNWKKLFQD YGTGSFSFSN 900
  901 LIQAVTRRFS TEFELQQLEQ FKKNNMDTGF GSATRALEQA LEKTKANIKW VKENKDVVLR 960
  961 WFTENSK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle