YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3676296
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATRRLLASL LRSTAQRGGA ISRSPLANSI PRTTSRASPK GFLLNRAVKY ATSAAAEKPK  60
   61 ATPPKPSGNE PTGKITDEFT GAGSIGKVCQ VIGAVVDVRF DEGLPPILTA LEVLDNQIRL 120
  121 VLEVAQHLGE NMVRTIAMDG TEGLVRGQRV LNTGSPITVP VGRATLGRII NVIGEPIDER 180
  181 GDINTDHFLP IHREAPAFVE QATEQQILVT GIKVVDLLAP YQRGGKIGLF GGAGVGKTVL 240
  241 IMELINNVAK AHGGFSVFPG VGEPSAEGND LYREMIESGV IKLGDKQSES KCALVYGQMN 300
  301 EPPGARARVG LTGLTVAEHF RDAEGQDVLL FIDNIFRFTQ ANSEVSALLG RIPSAVGYQP 360
  361 TLATDLGGLQ ERITTTKKGS ITSVQAIYVP ADDLTDPAPA TTFAHLDATT VLSRQISELG 420
  421 IYPAVDPLDS TSRMLSPHIL GEDHYNTARG VQKVLQNYKN LQDIIAILGM DELSEDDKMT 480
  481 VARARKIQRF LSQPFHVAEV FTGAPGKYVD LKESINSFQG VLDGKYDDLS EQSFYMVGGI 540
  541 DEVIAKAEKI AKESAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle