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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71901364, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNPSSTPLL FADLGLSDAV MQAVTKIGYE TPSPIQAATI PALLAGRDVL GQAQTGTGKT  60
   61 AAFALPLLTR TVLNQVKPQV LVLAPTRELA IQVAEAFQRY AASISGFRVL PVYGGQSYGQ 120
  121 QLAALKRGVH VIVGTPGRVI DHLERGTLDL SELKTLVLDE ADEMLRMGFI EDVEEVLRKL 180
  181 PASRQVALFS ATMPPQIRRI AQTYLQDPIE VTIATKTTTA ANIRQRYWWV SGLHKLDALT 240
  241 RILEVETFDA MIIFVRTKAA TEELAEKLQA RGLTAAAING DMQQAQRERT IHQLKDGKLD 300
  301 ILVATDVAAR GLDVERISHV LNYDIPYDVE SYVHRIGRTG RAGRSGEAIL FVTPREKGML 360
  361 RQIERATHQP IEAMQLPSVD AVNDTRVTKF FGRISNALVV GAEIDFYRKL LQRFESEHNV 420
  421 PAIEIAAALA RLLQGDSPFL LSVPTRPQRE RSELASEHHV KRPSSFKQTE RPNNTEHPKR 480
  481 PQRNAPARNV PEFGMESYRI EVGRMHGVKP ANIVGAIANE AGLESRYIGR IDIRDDHSVL 540
  541 DLPAEMPHEI LQHLKKVWVS GQQLQMHRID TTETTAPARE FKSKPGGAGK FPPKPHHNKS 600
  601 TKPKPPYSG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle