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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76165785, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNDKQVRLL AFKERTLLRL PFQLIPPPQA ASNVSWSRLL SYLRPYRGWI VVALIAMVIS  60
   61 AGLGLVIPLA IGQVVNLITG DQALPVVQIA QLLGIVMIGQ LLTGVIQTYC LSFVGERVVS 120
  121 DLRIAAYEHL QKLDLAFFEQ RRTGEITSRI TNDVTLIQTT VTNSLPTLLG GVIQLVGAVA 180
  181 LMLVVSWQLS GLALILVPTL VLIGVFFGRW LRQISTAVQD RLADATSILE ETVAGVRVVR 240
  241 SFRREDYEIT RFRAAVEATF ATALKLARIR AIFQPAMSLA VWMALIGILA IGGYLVSTGV 300
  301 LTTGSLISFL FYAVMAAGSM GVFASLFAQL QEALGATTRV FELLDQQPLV ADAPDAIPLP 360
  361 PVEGRIEFRE VSFAYQSATS NGSPAPVVLR DFSLTIEAGE MVALVGPSGA GKSTIASLIP 420
  421 RFYDVSAGSV LIDGYDVRRV QIQSLRDQIG IVLQETQLFS GSVRDNIRYG RLEATDEEIE 480
  481 AAARMANAHE FICQLPDGYD TPVGERGVRL SGGQRQRIAI ARAILKNPRI LILDEATSSL 540
  541 DSESERLVQE ALERLMAGRT SIVIAHRLST VQRADRIAVI VAGELVEIGT HHELLARDGV 600
  601 YARLYERQFL QPIPATAAV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle