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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CRK5_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.93
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAYTSLNFL FLLTFFIGSL RVSAQLQDPT YVGHVCTNRI SRNSIYFSNL QTLLTSLSSN  60
   61 NAYFSLGSHS LTKGQNSDMV FGLYLCKGDL SPESCRECVI FAAKDTRSRC PGGKEFLIQY 120
  121 DECMLGYSDR NIFMDTVTTT TIITWNTQKV TADQSDRFND AVLSLMKKSA EEAANSTSKK 180
  181 FAVKKSDFSS SQSLYASVQC IPDLTSEDCV MCLQQSIKEL YFNKVGGRFL VPSCNSRYEV 240
  241 YPFYKETIEG TVLPPPVSAP PLPLVSTPSF PPGKGKNSTV IIIAIVVPVA ISVLICVAVF 300
  301 SFHASKRAKK TYDTPEEDDI TTAGSLQFDF KVIEAATDKF SMCNKLGQGG FGQVYKGTLP 360
  361 NGVQVAVKRL SKTSGQGEKE FKNEVVVVAK LQHRNLVKLL GFCLEREEKI LVYEFVSNKS 420
  421 LDYFLFDSRM QSQLDWTTRY KIIGGIARGI LYLHQDSRLT IIHRDLKAGN ILLDADMNPK 480
  481 VADFGMARIF EIDQTEAHTR RVVGTYGYMS PEYAMYGQFS MKSDVYSFGV LVLEIISGRK 540
  541 NSSLYQMDAS FGNLVTYTWR LWSDGSPLDL VDSSFRDSYQ RNEIIRCIHI ALLCVQEDTE 600
  601 NRPTMSAIVQ MLTTSSIALA VPQPPGFFFR SNHEQAGPSM DKSSLCSIDA ASITILAPR

YRC Informatics Platform - Version 3.0
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