YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75907411, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTYIKSAFQE FLVTIEGFDQ LPSEELTQIL DNLQPFRYRI GQKIIGKERT PERVTIIYEG  60
   61 QVRLLGFDPQ TQVPTTLKLM KPGEIIGEIG LLRDVACETA IASADEVIGL TLNATDYLRL 120
  121 LESYPGFAHA RQNQSYIIEV FDVLSSQLAN QANVISNLDE LAAQALENAK IDYLPPGRNF 180
  181 FHQLDSESIW FVSGGTVTNY PIGSRLEPSD GNRVIEVQGE SPARLVGLEP LDLLFLENDY 240
  241 HQGGELTVYD SSPKITEALD IPYASEEELS QSSSVPSNAK PRQKFPFVRG KGELNSTFAC 300
  301 FQMLTKHLQI PFRKEVVRRI LNEQMKRQGT ISFPACAYLS ELIGLKANLV DLPAAAITRV 360
  361 PTPALVRYGD GYAVLYAADA NNVVLGVPSQ GIVRCKPAQI LEHLNIVEDS YPPQIRVLLL 420
  421 SATKETPQER FGLRWFIPYL SRYRRVLIEV FIASFFVQLA ALANPLVIQL IIDKVIVQNS 480
  481 ISTLNVLGVL LLAVGVFEAV LTTLRTYLFV DTTNRIDMGL GSEIIDHLLR LPLRYFEKRP 540
  541 VGELATRINE LENIRQFLTG TALTVGLDAV FSVVYIIVML FYSWQLTLVG LGTIPIFIVI 600
  601 TLIASPTVSR QLRSKAERNS ETQSYLVEVM SGIQTVKAQN IELRSRFSWQ ERYARYVAAG 660
  661 FKNVITSTLA NSTSQFLNKL SSLLVLWVGS YLVLQGELTL GELIAFRIIS GYVTSPILRL 720
  721 AQLWQSFQET ALSLERLSDI VDTPQEAEID RYNIPLPEIQ GSVKYENISF RFAPSGPLQL 780
  781 SNVNLEIPSG KFIGIVGQSG SGKSTMMKLL LRLYDVESGR ILIDGYDIAK VELYSLRRQV 840
  841 GVVPQETLLF DGTVQENIAL TNPDASTDEI IEAARVAAAH EFIMSLPNGY NTRVGERGAG 900
  901 LSGGQRQRIA IARSVLQRPK LLVLDEATSA LDYPTERQVC LNLAKAFQGS TVFFITHRLN 960
  961 TVSHADMIVV MDAGKVIEQG SHQELMAAKG HYFYLYQQQE VNL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle