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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47211485
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRLTVLAGV CLLMCHLGSA TKMVCYFTNW SQYRPGDGKY MPQDVDPFLC TTLIYAFSII  60
   61 NSNNELVTYE WNDETLYKTF NGLKAKNPQL KTLLAVGGWN FGSTQFSITV STQANRQKFI 120
  121 QSSIKFLRTH GFDGLDLDWE YPGSRGSPPE DKHRFTLLCR ELVQAYAAEA AATGKPQLML 180
  181 TAAVSAGKGT IDAGYEIAEI AKELDFINVM TYDFHGAWDR FTGHNSPLYR GSHDSGDLIY 240
  241 FNTDSAMKYW RDNGTPVEKL KIAFATYGRT FRLASSNTGV GAPASGAASA GPYTREAGFW 300
  301 SYYEICTFLK GASIQWIDDQ KVPYATKNSE WVGFDSKESY ETKVRYLQDQ KYGGAFVWAL 360
  361 DLDDFAGRFC GEGSHPLLGH LRKLMDVGSL QFYIQIAATA KLVCYFTNWS QYRTGAGKFL 420
  421 PETIDPFLCT HLVYASAIVD HSNEVTQQDE TSEKQLYASF LKLKDRNPQL KMLLSVKDDE 480
  481 GHQFSTMMST PGFRQTFIQS AVRFLRNHGF DGLDLDWQYN GSGPADDIQG FTLLCKTCSF 540
  541 LKGTLVHWIN GQNVVYATKG NQWVGFDNQR SYDAKVAFLN SRQLGGAAVW TLDMDDFSGQ 600
  601 FCGQGSYPLI SHLKVKLISA FAAAELMGCT YGQAKHWCCT NASMESCLLH GVTL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle