YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71849286, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVTQDLSIL HLILQASAVV QAVMALLAGV SFMSWYYIFM KLFSVKQARS KTETFERDFW  60
   61 SGGDLNNLYN SAVNDRHHAG SMERIFEAGF REFTKLKGQK NLDPKDIVDG SRRAMRATYQ 120
  121 REMDALESHL SFLASVGSVS PYIGLFGTVW GIMHAFRGLS NVGQATLASV APGIAEALVA 180
  181 TAIGLFAAIP AVLAYNRFSH DIDRLATRYE SFMEEFSNIL QRQMR

Type	Start	End	Confidence
Non-Cytoplasmic	1	17	0.87
Transmembrane Helix	18	39	0.94
Cytoplasmic	40	129	0.97
Transmembrane Helix	130	153	0.88
Non-Cytoplasmic	154	172	0.85
Transmembrane Helix	173	195	0.88
Cytoplasmic	196	225	0.94