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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116054303, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.16
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRLQAVLLL CLACCWPGLA GALTLTPEER AWLAEHPSIR LGVDTSWPPF EFRDEQGRYQ  60
   61 GLAAGYVSLL QERLGVSLTP VEPKTWTQVL EQAKDGRLDL LPGIMATPER QEYLSFTRPY 120
  121 LDFPIIILAR KNGPMPKRID ELYGLKVAVV DHYAPHELLI AQHPDLTLLP LPSVAAALQA 180
  181 LATGQADAFV GDFASSVWNL RQLKLNGLEI SGETPYRYQL AMAVPRGQPI LAGIVDKVLA 240
  241 DLSAEEIERL QAPWVGGLLD RRPAWREMAT YGLPIVLLIL VSVAILLAMN RRLRREVSRR 300
  301 RQLERELRDS EQHYRGLVES LNAIAWEMRL EENRFTYVSP HAERLLGYPL GEWLQPGFWQ 360
  361 RTLHPMDAEY AIHYCMSESQ AGRDHSFDYR MLAADGRVVW IRDLVTPIAQ GRDLLLRGLM 420
  421 IDITEAKLTE QAMRLSEQKF ASVFHHCPDM VVLANGADGR FLAVNNTFEQ QIGIAADDAI 480
  481 GKTATELGIW ALPGLGPQVL EKLGHGNLTN LEVPLRRRNG STFSALLSAQ HVALDQTPAL 540
  541 VVVIRDITHL VETQELLRIS EEKFANAFHA YPDGLLISRL EDGTLIDVNE GFTRLTGYRR 600
  601 DEVISRSTLE LGLWVDTEDR KRLISLVRHH TLTQGFTAPV RDRNGGIRQC EMSAHRISID 660
  661 GEDCVLTIAR DITERQLMQE KLQQAATVFE STAEGVMITD TRQRITAVNR AFSEITGYSE 720
  721 QEALGRSPSL LSSGQHDSSF YLAMWNQLER DGHWQGEIWN RRKTGELYPE WLTISAVHNP 780
  781 QGEITHFVGV FADISTLKYA QARLDYQAHH DPLTGLPNRL LFESRLNHAL DEAREESRPG 840
  841 AVLFIDLDRF KHINDSLGHP IGDLLLKAIA ERLRDQLRDV DTVARLGGDE FIILLPGLHQ 900
  901 ESDAEHVARK LLNAFTAPFQ AEGHEFFVSA SVGIALFPKD GDDAPTLVKN ADAAMYRAKS 960
  961 RGRSRIEYYT RELTYLATER MALETELRRA LERDELQLYY QPKLSLESGL LVGAEALVRW1020
 1021 YHPLFGEISP ERFIPLAEDC GLILPLGDWV LGHACQQMGE WQKLHAPFGP LSVNLAGAQL1080
 1081 GQPQLIERLE QLLEQSGLEP SRLQLEITES FIMNQTEEAL AVLHGLKRLG VQLAIDDFGT1140
 1141 GYSSLSYLKR LPLDILKIDK SFIRGLPDDP HDAAITRAII ALGRSMQLTV IAEGVETEGQ1200
 1201 QSFLTHEGCE QIQGFVLSPP LPAELFASKF LKPRQPIGAP REAPV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle