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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3800764
Protein type: Transmembrane
Type Confidence: 0.60
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPPALPDLH KELRPRTSMP GSLLVSTFVG LVLNKTKSSK VVQGLTGLRN LGNTCFMNSI  60
   61 LQCLSNTKEL RDYCLQNQYL RDLNNNSRMR TPLMSEFAKL IQLLWTSSPN DSVSPSEFKT 120
  121 QIQRYAPRFV GYNQQDAQEF LRFLLDGLHG EVNRVLVRPR ANADTLDHLP DDEKSRQMWR 180
  181 RYQEREDSRV SDLFVGQLKS SLTCSECGYC STAFDPFWDL SLPIPKKGYG EVTLMDCLRL 240
  241 FTKEDVLDGD EKPTCCRCKA RTRCTKKFSI QKFPKILVLH LKRFSEARIR ASKLTTFVNF 300
  301 PLKDLDLREF ASQSCNHAVY NLYAVANHSG TTMGGHYTAY CKEPHLQEWH SFNDSRVTPM 360
  361 SSSHVRSSDA YLLFYELASP SSRMYPAPGH PSEPPTWIWA PQEQQKAPRR GQDPGSPSAS 420
  421 GPLAFAFYPW GRFFFFSFWC VIKILSKGRG AACSHRDLGD TRSWVSSGIS VPLCHPRGSV 480
  481 SLLPAPPNLL VKDRSSSVAS IPPPSSFRSA PDSRPGGRMM LHGVSFYLSR TSLSPDHPSW 540
  541 LPRDSGRGGL THLLIRRCLK PFRGAGGPWG AQGCPSYPGV GGWAAPF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle