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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|186464265, gi...
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFSWKVVVL WTLPALVIGF FFWQGAFAGA PTDMSKNAAN TRMTYGRFLE YLDGDRVSSV  60
   61 DLYEGGRTAI IEARDPDIEN RIQRWRVDLP VNAPELISKL KEKDISFDAH PMRNDGAIWG 120
  121 LLGNLVFPVL LITGLFFLFR RSSNLPGGPG QAMNFGKSKA RFQMEAKTGV KFDDVAGIEE 180
  181 AKEELQEVVT FLKQPERFTA VGARIPKGVL LVGPPGTGKT LLAKAIAGEA GVPFFSISGS 240
  241 EFVEMFVGVG ASRVRDLFKK AKDNAPCIIF IDEIDAVGRQ RGAGIGGGND EREQTLNQLL 300
  301 TEMDGFEGNT GIIIIAATNR PDVLDSALLR PGRFDRQVTV DAPDIKGRLE ILEVHSRNKK 360
  361 LDPSVSLDAI ARRTPGFTGA DLANLLNEAA ILTARRRKEA ITLREIDDAV DRVVAGMEGT 420
  421 PLVDSKSKRL IAYHEIGHAL VGTLLKDHDP VQKVTLIPRG QAQGLTWFTP NEEQGLISRS 480
  481 QLKARITGAL GGRAAEEVIF GAAEVTTGAG GDLQQLSGMA RQMVTRFGMS DLGPLSLESQ 540
  541 QGEVFLGRDW TTRSEYSESI ASRIDGQVRA IVEECYDNAK KIVRDHRTVT DRLVDLLIEK 600
  601 ETIDGEEFRQ IVAEYAEVPE KQQYVPQL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle