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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3882215, gi|7...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AGPGAAGEAL AVLTSFGRRL LVLIPVYLAG AVGLSVGFVL FGLALYLGWR RVRDEKERSL  60
   61 RAARQLLDDE EQLTAKTLYM SHRELPAWVS FPDVEKAEWL NKIVAQVWPF LGQYMEKLLA 120
  121 ETVAPAVRGS NPHLQTFTFT RVELGEKPLR IIGVKVHPGQ RKEQILLDLN ISYVGDVQID 180
  181 VEVKKYFCKA GVKGMQLHGV LRVILEPLIG DLPFVGAVSM FFIRRPTLDI NWTGMTNLLD 240
  241 IPGLSSLSDT MIMDSIAAFL VLPNRLLVPL VPDLQDVAQL RSPLPRGIIR IHLLAARGLS 300
  301 SKDKYVKGLI EGKSDPYALV RLGTQTFCSR VIDEELNPQW GETYEVMVHE VPGQEIEVEV 360
  361 FDKDPDKDDF LGRMKLDVGK VLQASVLDDW FPLQGGQGQV HLRLEWLSLL SDAEKLEQVL 420
  421 QWNWGVSSRP DPPSAAILVV YLDRAQDLPM VTSELYPPQL KKGNKEPNPM VQLSIQDVTQ 480
  481 ESKAVYSTNC PVWEEAFRFF LQDPQSQELD VQVKDDSRAL TLGALTLPLA RLLTAPELIL 540
  541 DQWFQLSSSG PNSRLYMKLV MRILYLDSSE ICFPTVPGCP GAWDVDSENP QRGSSVDAPP 600
  601 RPCHTTPDSQ FGTEHVLRIH VLEAQDLIAK DRFLGGLVKG KSDPYVKLKL AGRSFRSHVV 660
  661 REDLNPRWNE VFEVIVTSVP GQELEVEVFD KDLDKDDFLG RCKVRLTTVL NSGFLDEWLT 720
  721 LEDVPSGRLH LRLERLTPRP TAAELEEVLQ VNSLIQTQKS AELAAALLSI YMERAEDLPL 780
  781 RKGTKHLSPY ATLTVGDSSH KTKTISQTSA PVWDESASFL IRKPHTESLE LQVRGEGTGV 840
  841 LGSLSLPLSE LLVADQLCLD RWFTLSSGQG QVLLRAQLGI LVSQHSGVEA HSHSYSHSSS 900
  901 SLSEEPELSG GPPHITSSAP ELRQRLTHVD SPLEAPAGPL GQVKLTLWYY SEERKLVSIV 960
  961 HGCRSLRQNG RDPPDPYVSL LLLPDKNRGT KRRTSQKKRT LSPEFNERFE WELPLDEAQR1020
 1021 RKLDVSVKSN SSFMSREREL LGKVQLDLAE TDLSQGVARW YDLMDNKDKG SS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle