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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AMPN_FELCA
Protein type: Globular with Signal Peptide
Type Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKGFYISKP VGILAILLGV AAVCTIIALS VVYSQEKNRS TESSTAASTA APTGPTTTVA  60
   61 TTLDQSKPWN VYRLPKTLIP DSYNVTLRPY LTPNNKGLYV FTGTNIVRFT CKESTNIVII 120
  121 HSKRLNYTSH QGHMVALSGV GGFHPQPVIV RTELVELTEY LVVHLQEPLV AGRQYEMNSE 180
  181 FQGELADDLA GFYRSEYMEN GVKKVLATTH MQATEARKSF PCFDEPAMKA TFNITIIHPN 240
  241 NLVALSNMLP RGPSVPFGED PTWKVTEFET TPIMSTYLLA YIVSEFSYVE TRAPSGVLIR 300
  301 IWARPSAINQ GHGDYALKVT GPILDFFSQH YDTPYPLNKS DQIALPDFNA GAMENWGLVT 360
  361 YRESALLYDR QSSSSGNQER VVTVIAHELA HQWFGNLVTL EWWNDLWLNE GFASYVEYLG 420
  421 ADFAEPTWNL KDLMVLNDVY RVMAVDALAS SHPLSTPASE INTPAQISEV FDSISYSKGA 480
  481 SVLRMLSNFL TEDLFKMGIA SYLHTYKYGN TIYLNLWEHL QQVVDKQPTI KLPDTVSAIM 540
  541 DRWILQMGFP VITVDTQTGT ISQQHFLLDP QSVVTRPSQF NYLWIVPISS VRSGSPQAHY 600
  601 WLPGVEKAQN DLFKTTANDW VLLNLNVTGY YLVNYDNENW KKIQTQLQTD LSVIPVINRA 660
  661 QVIHDAFNLA SAQKVPVTLA LNNTLFLIQE TEYMPWQAAL SSLSYFKLMF DRSEVYGPMK 720
  721 RYLKKQVTPL FNHFERVTKN WTDHPQTLMD QYSEINAVST ACSYGVPECE KLAATLFAQW 780
  781 KKNPQNNPIH PNLRSTVYCN AIAQGGEEEW NFVWEQFLKA ELVNEADKLR GALACSNQVW 840
  841 ILNRFLSYTL DPNLIRKQDV TSTLSSISSN VVGQTLVWDF VQSNWKKLFQ DYGTGSFSFS 900
  901 NLIQAVTRRF STEFELQQLE QFKKNNMDTG FGSATRALEQ ALEKTKANLK WVKENKDVVL 960
  961 RWFTENS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle