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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ACTNB_DICDI
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHSTPLNEE IVHKKNDENW VIAQKKVFTN WCNIFLNQRS QKIEDLETDL YDGILLGSLL  60
   61 EILSGKNVIL SKCKQLKTRL HYINNLNFSL KFIGDEGLRL VGVASEDITD GNLKLILGLV 120
  121 WTLILRYQIQ SMQNSKSSQQ NLHSSTKPSE LMLNWVKSQI SDYGHHIKDL TTSFQNGLLF 180
  181 CALVHKLVPE KLDYKSLSES DSLGNLTLAF EVANKELGIP SILDPHDIIT TPDELSILTY 240
  241 ISLFPKVYQQ TLEPLNNNNN ISPSLSSSSS SLLNTPNKRN SIQLSKSTSF EQQNQQQQQQ 300
  301 NLLSPNSYRN SISFSKSPSF EGSQSTGSSR SISPISSPIK NSTTGNSNLS KSTSFEKIEA 360
  361 SNTTNNNTII IAEESRVIEK IVEKIIEVEK IVEVEKIVEV EKIVEVEKIV EVEKIVKVDD 420
  421 IEKLTNLQDQ LTEQQQQYQE KSLKLVNLEL ELQEKSNQLV DKSNQLSTMQ ATNSELMEKI 480
  481 GGLMNDLTDI PTQDIKEKDE IIANLKIESE KNLKCFQDDF NALQSRYSLT IEQTSQLQDR 540
  541 IKQLINELQE RDDKFIEFTN SSNQSLADNQ RVIDQLTNEK QSITLQLQDQ QDIKEKEFQF 600
  601 EKQQLLSQID SITTNIQEYQ DKFNNLQQEF NTQQTLNQQE THRLTQQLYQ INTDYNEKQT 660
  661 QLQSEIKDNQ TINEQLNKQL SEKDKEIEKL SNQQEQQQDE KINNLLLEIK EKDCLIERIN 720
  721 QQLLENIDLN SKYQQLLLEF ENFKLNSSKE KENQLNELQS KQDERFNQLN DEKLEKEKQL 780
  781 QSIEDEFNQY KQQQLSSNSN IDQQLQSTII ELSELKEQKE LNDSKLIEKE KQLQQLQQEF 840
  841 DQLNEKNQKD HQDQLELLEK QLKQLQQEYD QLNETNQSIE NQLNQQNLIN KENLNEKEQE 900
  901 LLKLQNQLNQ QIEKIQFDQQ EFSKQNSINI ELVNEKNEKL IQLQQDYDQL KQQNRSNDEK 960
  961 DENDLIEKEN QLKSIQNELN QLIEKNESDH KEQQLKQQSI ENDLIEKENQ IQQLQSQLNE1020
 1021 QRQQQSNQLS EKDQQLNQLI EKNQFDQKEQ QLKQQSIEND LFEKENQIQQ LQSQLNEQRQ1080
 1081 QQSNQLSEKD QQLNQLIEKN ESDQKEQQLK QQSIENDLIE KENQIQQLQL QLNEQRQLQS1140
 1141 EVSIDNDKIL ELEKQLKQCQ SDLLKLNDEK QQQDKQLQDK QIEFDQLQLT FNQFKNDKDS1200
 1201 QFIQLQDDQK QQLQSIQQDL NQLKQENQEK EKQLSEKDEK LQSIQFENQE KEKQLSEKDE1260
 1261 KLQSIQQNLN QLNDENQEKV KQFSEKDEKL QSIQQDLNQL KQENQEKEKQ LSEKDEKLQS1320
 1321 IQQDLNQLND DQIKKNEKLK EKEEQLLKLQ QDFNDQQSQQ LKQLEEKLSE KENQLQQLKQ1380
 1381 ENEINQLNQQ QQSNEIIQQL KDQLLKQQQQ EQQENNNEKE IERLIQEIEQ LKQQQEIDQS1440
 1441 ELSNKEIKIQ TTQQEFDQLS HNRSKDQLHL QQLQQELDQL KQSFDDQDHQ FKKVIDERYN1500
 1501 LQLQLEQSTL SNNQLDQLLK EKLKPLELDS NEKQKTIDDL LSNISNLQIS LQNDKDLISE1560
 1561 RNNSIKTLES RITQQLSLLD EKDNLIKDLQ QQKQQQQQPP TASSSPSSSP SLLSSTPTPK1620
 1621 PQRPNQIEID RLVNEIVNRN QDLIRKNKTK FYKLENGDYI VNSIIYRLSL DDDNDSDLIA1680
 1681 QEYENGNSTT FEKSLRIFPS KNTRPIFDWR ALFFIGAAVL AISTLFSSSR PIKYEKPT

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