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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39590860, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRLSLLGLT AAVVLLSSFY TDRIHVDAAA ACKGCAPPCV CPGTKGERGN PGFGGEPGHP  60
   61 GAPGQDGPEG APGASGMFGA EGDFGDVGAK GARGDRGLPG SPGHPGLQGL DGLPGMKGEE 120
  121 GIPGCNGTDG FPGIPGLAGP PGQPGPNGNQ GRPGIPGPPG EGGVNSQGRK GVKGESGRPG 180
  181 VPGLPGNSGY PGLKGAKGDP GPYGLPGFPG VGGLKGRMGM RTSGVKGEKG LPGPPGPPGP 240
  241 PGSYPWASKP IEMEVLQGPV GPGGVKGEKG RDGPVGPPGM LGLDGPPGYP GLKGQKGDPG 300
  301 DAGQRGKRGK DGVSGSYGEK GTQGEQGVPG TPGYPGTKGE AGEPGYPGRP GFEGDCGPEG 360
  361 QLGEGTGEAG PRGAQGFDGV QGAKGLPGHN GLPGPVGPRG PVGAPGAPGM PGIDGMPGYT 420
  421 EKGDRGEDGY PGFAGEPGLP GESGDCGYPG EDGLPGYDIQ GPPGLDGQSG RDGFPGIPGD 480
  481 IGDPGYSGEK GFPGTGVNKV GPAGMTGLPG EPGMPGRIGM DGYPGPPGNN GERGEDCGYC 540
  541 PDGLPGNPGD VGYPGMNGYP GPPGPNGDHG DCGMPGLPGK PGAPGADGIN GSPGLPGIPG 600
  601 YPGMKGEDGE IIGPMENPAG IPGLKGDRGL PGLPGRQGND GLPGLPGSPG QDGFPGLRGE 660
  661 PGLSGIDGKR GRQGSLGIPG LQGPQGDSYP GQPGTPGFKG EAGANGLPGL PGAQGPRGIP 720
  721 APLRIVNQVA GQPGVDGMPG LPGDRGADGL PGLPGPVGPD GYPGTPGERG MDGLPGFPGL 780
  781 HGEPGMRGQQ GEVGFNGVDG DCGEPGLDGY PGQPGAPGAP GETGYGFPGQ VGYPGPNGEP 840
  841 GAAGLPGPDG YPGRDGLPGT PGYPGEVGMN GQDGAPGMPG ARGESGLVGI DGKKGRDGQP 900
  901 GPRGQDGVPG YRGEAGAPGQ NGMDGYPGAP GDNGYPGAPG QDGYPGPNGI PGEDGLVGFP 960
  961 GLRGEHGDNG LPGIEGECGE EGARGTDGLP GYPGEQGQDG HPGLPGADGL PGLSGEPGDS1020
 1021 GMPGYRGQPG EPGNLAYPGA PGDLGYPGPD GPPGLAGPDG LPGLNGERGE VGDSYPGNPG1080
 1081 LSGQPGDAGY DGLDGVPGPP GYPGITGMPG LKGESGLPGL PGRQGQDGLP GAPGLEGECG1140
 1141 EQGFPGAPGQ PGYPGQQGRE GEKGYPGMPG ENGLSGLRGQ DGLPGLKGEN GLDGQPGYPG1200
 1201 APGQLGTPGD VGYPGAPGEN GDNGLQGRDG QPGLRGEPGQ PGMPGLQGRD GQTGPIGPPG1260
 1261 DDGYPGAPGQ DTYGQPGQAG QDGYPGLDGL PGSPGLNGEP GTPGQYGMPG LPGMPGEPGQ1320
 1321 TGYPGERGLV GIDGKRGHDG LPGAPGLDGV IGVPGVEGDC GEDGLPGLPG APGSNGYPGE1380
 1381 RGLPGVPGQQ GRSGDNGYPG QPGQPGLKGP RGDDGYPGRD GLDGMPGRGG PQGLPGPLAM1440
 1441 EIRNPPGLSG DNGYPGEKGY PGLPGDNGLP GPPGKAGYPG ASGQDGYPGP PGLPGTPGGL1500
 1501 GDQGFQGERG RGGHPGLPGT PGYPGSPGGW APSRGFTFAK HSQTTAVPQC PPGTSQLWEG1560
 1561 YSLLYVQGNG RASGQDLGQP GSCLSKFNTM PFMFCNMNSV CHVSSRNDYS FWLSTDEPMT1620
 1621 PMMNPVTGTA IRPYISRCAV CEVPTQIIAV HSQDTSVPQC PQGWSGMWTG YSFVMHTAAG1680
 1681 AEGTGQSLQS PGSCLEEFRA VPFIECHGRG TCNYYATNHG FWLSIVDQDK QFRKPMSQTL1740
 1741 KAGGLKDRVS RCQVCLKNR

YRC Informatics Platform - Version 3.0
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