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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|187039262, gi...
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFDSSQLGP DIDEFLNNPD FPAHFDELEL DSLLYEESAS QESSPSSSFG FSDENAGFRS  60
   61 RDGGSLGDSS SSDSSPPLSC TNFTENDQEM WEFGFQNPNP FENFDQRFDQ SYQQQEEVFD 120
  121 DQHGEYQEIQ YVEEEKIQSE FQRPNKIIAI LPRPQQIKRV ITKPVHKIYR VKESEHQQVQ 180
  181 QHHTTYKAVP VASFFFEIFY GYSRCVWKYS NNLPIQPKQG QLTRIVPARV SAQTVSPQKR 240
  241 EAKQPGFTQD QRKIRNRMYA QASRIRKREA EEEMKRTIEE LTTENDILRN ENTILKQRLA 300
  301 YYEPETPTYE YSPMEKRSQV RKKMMAAGTV LMIFGLFAVI SPFNVENTLH VKPQIIAIPN 360
  361 ETVMMARHSR VLIAEEAPPV SKLPHHTVHN YPNSTQTDCE MYKLNATETR RVNSEIERWV 420
  421 QVHSFDNVPI QHSGGLFNKE AMRKFNEARK QKNPVAFGPE TLQAKKKSEK AAQQFRERTW 480
  481 LQLDQLNTAN KIGVKNEKVE NKSQDIAKIA SIVRQKRDTL YIMALQDYVL LPSLTKGGNT 540
  541 IPKLSLLLPS VPMNGTIQDQ YTLLRVDCEV TGTGRLTLSN KQLSYLMP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle