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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39584694, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSEVPTVAF QRLKKDYQRL LKEPVPYMKA APLESNILEW RYIIIGAPKT PYEGGIYHGK  60
   61 LLFPKDFPFK PPAILMLTPS GRFQVNTRLC LSISDYHPDT WNPAWTVSTI ITGLMSFMND 120
  121 NQPTLGSLNS SESERRLLAK KSKAFNIKDK VFCTMFPEEA QEIRDDIQKM NQEELDSIKD 180
  181 EETAIRNRRR GDASRGVPRL SALLSNMMMI AGVAINRLTN GEMRFYRTYL LVAGAFCSIC 240
  241 TLAVIFNCGW EDNSEIRGRE NGKNASFTLK LSCYDLKLPE NPALPKKFDK KAPGTVVADF 300
  301 AAKPFEEIRC SFKLVSIYRS FRIGIFGHNI ALASTAHLSE TFLFVSVLSS PNETERRQNV 360
  361 RETWFRLSAK GPSVFIAKFV VGTMGLDSEE RKILEEENAK FGDLSFLKRH EEAYDKLAKK 420
  421 TLFSFQNAYD NFKFKFFLKT DADSFVRITP LIMNLKTVQH PMLYWGFLDG RAKPFRKGKW 480
  481 KEPEWNLCDR YLPYQLGGGY ILSYELVRFL ATNAPLFRIY KNEDVSVGAW LAGLDVKYVH 540
  541 DPRFDTEWTS RGCSNEYLIT HKHTMQEMTQ MYENLKTTGK LCAKEFQRRL SYVYDFSKPP 600
  601 SECCTRVNGT NIP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle