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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39579434, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSAVASRLS WGLILSSIDF LACLLFTCLH DGTFKFANFT GQFSDFSFFT STIDLFLLQI  60
   61 LRFALWMVPA AIHMANKADT LTMWKEPIFC TSLLICAASP TKLLLLTEKL KPGEFLTFGD 120
  121 TAFLVWNFLA AIILNSSWTR FFIRTPSSYI ILEDEDMEQA PKQTFELIFR LLQYCKREWL 180
  181 WHISGFSWLF IYSITRIFVP YYTGQVIATV VATKSYPALS NAVYIMTIIS LVSAVAAGFR 240
  241 GGSFEYAYAR IQRSIRYDLF HGLVKQDVAF YDAHKTGEIT SRLAADCQTM SDTVALNVNV 300
  301 FLRNCVMLLG SMIFMMKLSW RLSLVTFILV PIIFVASKIF GTYYDLLSER TQDTIAESND 360
  361 VAEEVLSTMR TVRSFACENV EADRFYGKLT HTLDVTRTKA IAYIGFLWVS ELFQSFIIVA 420
  421 VLWYGGHLVL TQKMKADLLV SFLLYQMQLG DNLRQMGEVW TGLMQSVGAS RKVFEYIDRE 480
  481 PQIQHLGEYM PENVVGKIEF RNVHFSYPTR SDQPILKDLS FTVEPGETVA LVGPSGSGKS 540
  541 SCISLLENFY IPNAGQVLVD GVPLEDYEHH YIHKKIALVG QEPVLFARSV MENVRYGVEV 600
  601 ADTDVIRSCE MANAHGFIMQ TTLKYETNVG EKGTQMSGGQ KQRIAIARAL VREPAILLLD 660
  661 EATSALDTES EHVVQEAIYK NLDGKSVILI AHRLSTVEKA DKIVVINKGR VEQIGNHESL 720
  721 LKDTEGTYAK LVKRQMMGDQ KPRKRTTVPR SGPQPATSIN VAGPSQGNAM SLLSTSFSQS 780
  781 ASSVTSH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle