YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25012844
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRTRLIQAA SSAQRAFSTS QKALAAKQMT VRDALNSALD DELARDDRVF ILGEEVAQYD  60
   61 GAYKVSRGLW KKYGDKRVID TPITEMGFAG IAVGAAMAGL RPVCEFMTWN FSMQAIDHII 120
  121 NSAAKTFYMS AGAVNVPIVF RGPNGAASGV AAQHSQCFAA WYAHCPGLKV LSPYDAEDAR 180
  181 GLLKSAIRDP DPVVFLENEL VYGTAFPVAD NVADKDFLVP IGKAKVMRPG KDITLVAHSK 240
  241 AVETSLLAAA ELAKKGIEAE VINLRSIRPL DTATIFASVR KTHHLVTVEN GWPQHGVGAE 300
  301 ICARIMEDQT FFELDAPVWR CAGVDVPMPY AKTLEAHALP RAQDLVEATL KVLGGKVGKA 360
  361 AAANK

Type	Start	End	Confidence
Signal Peptide	1	18	0.79
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	365	0.96