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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25012574
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCDQSKDCSD GSDEHNCNQT CRADEFTCGN GRCIQKRWKC DHDDDCGDGS DEKECPVVPC  60
   61 DSVAEHTCTN GACIAKRWVC DGDPDCSDGS DERSCANVTK TTTPCLSHEY QCKDRITCLH 120
  121 HSWLCDGDRD CPDGDDEHTA NCKNVTCRAD QFQCGDRSCI PGHLTCNGDK DCADGSDERD 180
  181 CGLSLSLGIN QGGCNATSEF DCGGGQCVPL SKVCDKRKDC PDGEDEPAGK CGINECASKN 240
  241 GGCMHQCIDL KVGHHCECHE GYKLSPDKRN CQDINECEVP GKCSQICVNE IGGFKCECEA 300
  301 GYMRDPKNHT RCKASEGHAS LLLARRHDIR KIALDHMEMT SIVNSTKAAT ALDFVFRTGM 360
  361 IFWSDVTTQS IYKAPIDEGN EKTVVLTKSS VTSDGLAVDW IYNHVYFTDT HKCTIELTNF 420
  421 EGSMGKVLVK DSLDIPRSIA LDPIEGWMYW SDWGASPRIE RAGMDGSHRT TIISYDVKWP 480
  481 NGITLDLVKK RIYWVDGKLN VISSANYDGS QRSQVLYSGE YLRHPFSITT FEDNVYWTDW 540
  541 DKQAVFKANK FTGEDVEPVT AMHMLQHPMV VHVYHPYRQP DGVNHCQSVN GHCSHLCLPA 600
  601 PRINERSPRI SCACPTGLKL MVDGLMCVED LADQRPVKNH TQIEKTTTPS EQPDSGFIAL 660
  661 VVIASLSGFA VLLSVLLLIG YRYCSKRRIN SMNFENPIYR KTTTTEDHFS LRKNLPARIY 720
  721 DHTSVMDEEY SPVIGISSY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle