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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25012475
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSYFDSAIE YNRSNPISLA RTSSQAQTVQ NEKNWEWSYL VRKCRNLELE DSYDLYMRRL  60
   61 RVGYLSLFIF IHVAVTVIHT LLLLTTPEIK YVYVDMVAYM CSGLVIWVVL GVNFRSELVS 120
  121 KHGWVVYATS WLAVCVMVLM DIGLNVYHAT SHNDILNPIY DAYTLYAIYM FMPVPYLLQP 180
  181 FVLGSAVTFC YIINYSFVIT AKDDNQMHSI LNEAIYLSCV NLLGIFFRLM RDIALRTTFL 240
  241 DRRQYVEENL LLRYARDQER SLLLSILPAQ IADRLQEDVK NRIERSKQQH QQQSQVDLRR 300
  301 SADSQTLKRW RQPDHGTLFI EPHEDVTVLY ADVVNYTHLT TTLDVKKLVE ALHDLFVRFD 360
  361 IASEEYNVLR IKFLGDCYYC VAGLANPNAD HAKCCVDLGL RMIKDIRDVR EKRHLNIDMR 420
  421 IGVHSGDVLS GVIGAAKWQF DIWSKDVDIA NRLEATGATG RVHVSQKTLS LLDGEYFFED 480
  481 GTEKAREDPV LQKHGIRTFL IKSLRAPMHD PRRRMRERQV KKLSEASKAN FMHNSTLHQY 540
  541 NQVRNQAKLE MCRELDKMPI GRIQLTKVFR RSTRLTQDEI EEETFRRNIS SCCLFFRIRN 600
  601 WEFQYIKEPD VMLKYSIALA WVIYMGLLTI QLLSKDARYH YWYIDGTTII LLTMLLIVSW 660
  661 YKKLWIMYMS DADVSSPNGR LSGFLFRMSD EMQRNVVIRV VMYFLIIFSY CAVAIMQVVG 720
  721 CSSDEDYADL DPTYDERVQC FHPWILTNCM TLVISMSFLF TRIPFIIKSC FSALIMIGYA 780
  781 VLVVSEFNFI YANSPSTNVN FNAKYSHILL MIITFGIFHL MERQTEFIAK VDYNWKRQLI 840
  841 KKQEDALITN DTIKVLLTNI LPTHVADFYL SNQLQNELYY EEYDNVAVMF ASIKNFDTDK 900
  901 IGLRVLNEII CDFDDVLNKY SQSLRVEKIK VANWTYMAAC GLDVSRSEQV NAPQMKFRNV 960
  961 SLMPNGRRSR YDGARSSNAD GVQRVPYGNG SNIALDLDLE RGQYEGNVIT SGPRISSTHN1020
 1021 GSSSNEVVRV MAEFALDLMR TMRRFNTENM QTEYEGSTDY GMLRIGISHG RAMAGVVGIS1080
 1081 KPHYDIWGNP VNMASRMDST GVPGQIQVTE NTALKLREFN IQCNYRGMTF VKGRGNIPTY1140
 1141 IIGIDSEYQF LPHRPAAPTK ED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle