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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FB37_ARATH
Protein type: Transmembrane
Type Confidence: 0.70
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQSTSAAGN SILNRRRSKS FTLKFPIESI ESEISQPDYT SSLPDECLAL VFQFLNSGNR  60
   61 KRCALVCRRW MIVEGQNRYR LSLHARSDLI TSIPSLFSRF DSVTKLSLKC DRRSVSIGDE 120
  121 ALVKISLRCR NLKRLKLRAC RELTDVGMAA FAENCKDLKI FSCGSCDFGA KGVKAVLDHC 180
  181 SNLEELSIKR LRGFTDIAPE MIGPGVAASS LKSICLKELY NGQCFGPVIV GAKNLKSLKL 240
  241 FRCSGDWDLL LQEMSGKDHG VVEIHLERMQ VSDVALSAIS YCSSLESLHL VKTPECTNFG 300
  301 LAAIAEKCKR LRKLHIDGWK ANLIGDEGLV AVAKFCSQLQ ELVLIGVNPT TLSLGMLAAK 360
  361 CLNLERLALC GCDTFGDPEL SCIAAKCPAL RKLCIKNCPI SDVGIENLAN GCPGLTKVKI 420
  421 KKCKGVLGGC ADWLRTVRPM LSVNADTMEQ EHEEAASNDV VGGSQENGIE FPQLNSQIMA 480
  481 SSIASSSRNR SGYFKSGIGL FSGMSLVPCT SRQRRASR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle