YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2689727, gi\|5...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWLWVLGLV ALSECLVTIP LTRVKSMREN LREKDRLKDF LENHPYNLAY KFVDSVNLDL  60
   61 GIYFEPMRNY LDLAYVGTIS IGTPPQEFKV IFDTGSSDLW VPSIYCSSPA CANHNVFNPL 120
  121 RSSTFRISGR PIHLQYGSGT MSGFLAYDTV RFGGLVDVAQ AFGLSLREPG KFMEYAVFDG 180
  181 ILGLAYPSLS LRGTVPVFDN LWKQGLISQE LFAFYLSKKD EEGSVVMFGG VDHSYYSGDL 240
  241 NWVPVSKRLY WQLSMDSISM NGEVIACDGG CQAIIDTGTS LLIGPSHVVF NIQMIIGANQ 300
  301 SYSGEYVVDC DAANTLPDIV FTINGIDYPV PASAYIQEGP QGTCYSGFDE SGDSLLVSDS 360
  361 WILGDVFLRL YFTVFDRENN RIGLALAV

Type	Start	End	Confidence
Signal Peptide	1	15	0.94
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	388	0.98