YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GRLJ_DICDI
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILLYIAII LSFFSLITIS SECKIAVLLS GSPNDLGYNY LMNEARVKAE SELKLDFSIY  60
   61 YENLEESMEE AEKAFQDALH KGANLIVVGS FVHVGLGLKY AALTKDQDIY WIIRGNKRPN 120
  121 PDLPHVVILN FNSFELHYLL GYFSGLMTKT GIVGFVAPGP DVNTISTDNS FYLGAKYARP 180
  181 NITFLNVYVQ SWYNPNVSYS AAKMLIKNGA DLIGMSQDDM SCQKAMMDSG LIGIGATGYP 240
  241 THLLFGGNVG VSYITNWTNL YVKYAQHVLN DDWPDYSSYF TNLSREDSIF IDDYSYKVPI 300
  301 DIQNLVNDEI QRLKNTSYIP YRSDPYLAQL GIPFDSKGLL VEDQFRANKK LLKGDSISKV 360
  361 IDFGQYSIPI EFIDYPNSLK YGVTIVSGVC IFICLVCMTL VVVFKKARVI KSSSPAFLLL 420
  421 ILLGCCIIFA ACILFAQSPT NQTCSARIWL LSLGYTLFLG NLLVKNWRIW LLFDNPKLKK 480
  481 RAITNWKLYP WVFAILAIDV MILAIWQGLG NINAESRIGY DSLTQYQYKN VCSSDDQGSI 540
  541 ALYLLLVFHG LVLLVACFIS FKIKVVDIEE FNESKPITTS VYIITFCLFI VIPLMVSPQS 600
  601 LTSQTTIICV CAIVTTLISM LLLFGSKFYK MATQGLAINE TFATSTKSSS KSSKSSYGKD 660
  661 NPNPNAINFG EDDTSDETSE EKHKSPKQKS VNFSNKSNSH LAVFTSDEET SKTSKLSIDF 720
  721 ENSSKDISID QLQQQKQQPI NTNGDLENKS NDKIDDDNDN SSVLSKRISN QQNGETEIDS 780
  781 NNV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle