YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60473599, gi\|...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.92
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKSIIIIFT ILIIFLINSC ISQETEQPQQ TQQPNNRPSL KDESLIQQLD TNNIDRILNH  60
   61 GNSVWLLKFY APWCKHSQEF QKTFVEMSHL LKDHLSFGSV DCINDPMLLH RFEITAYPTL 120
  121 KFLYNGQLFE FQGERTIEHI VQFLQAGYKD VVAMPYPLID QQEILKRQLE LQYSREGMSQ 180
  181 EQIDQMEKQI KEKQQEYEIK RNARKYLEVE HDHDEEKEIA EYKERINNRK SNNADNGEVL 240
  241 DKEPPKVPGN STIDSNSINI LESILDSKIA YLLFGSISTG LFFIIKKRIS KKSKFMKIA

Type	Start	End	Confidence
Signal Peptide	1	22	0.95
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	268	0.99
Transmembrane Helix	269	285	0.94
Cytoplasmic	286	299	0.85