YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ALG2_DICDI
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKDEKELNI AILHPDLGIG GAERLIVDLA LGLKSVGNNR ITMYTSRHDP KRCFKETSNG  60
   61 ELDVHVTGGY FPRHIFNRFM VICAIIRNLL AALYIIFFSG QKYDVIVLDQ ISASIPLFKL 120
  121 FTNSKVLFYC HFPDKLLTSR TSLIKRLYRI PIDLFEEFTT GCADQVLVNS NFTSSIYKQS 180
  181 FKHLKNSPSV LYPIINTNEF DKTKQSHNFS NQPIENNLIN PIKLDDKKFF LSINRYERKK 240
  241 DLKLALDAFS VFISNSESGG SGKGKDEIYL VFAGGYDTGL KENVEHLQEL KDKAKEYGLE 300
  301 NRVIFLITIN EEQKQWLLLN CCCLIYTPSF EHFGITPLEG MYAGKPVIAV NNGGPLETVV 360
  361 DGKTGYLCNP TVKDFANAFN KIINDPINSK KMGINGKQRV NDKFSFKPFA QNLNTIVKKL 420
  421

Type	Start	End	Confidence
Cytoplasmic	1	78	0.69
Transmembrane Helix	79	98	0.68
Non-Cytoplasmic	99	420	0.94