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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MYOJ_DICDI
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTSTIENGA SSPIIVSSST PKLYQEGAGV WIPDQELGWI GADVIEHSET SADQVLVRTE  60
   61 DDREVKIPLS KVFQKNPDIL EGVDDLSFLS HLHEPAILHN LHHRYNLNQI YTYIGKILIA 120
  121 INPYTSLPLY GKEMISAYYG KQLGTLAPHV YAVAEDAFKD MRYDGTSQSI LVSGESGAGK 180
  181 TETTKFLLQY FAAMGNMIKE STSSSSINGI NTSSDGIPVT PPPSPMKKSP VDKSVEERVL 240
  241 ESTPLLEAFG NAKTLRNDNS SRFGKFIEIH FNEMGSIIGA KILTYLLEKS RIVRQVYNER 300
  301 NYHIFYQLLS GASEELKEKL NLKTIEEYSY LNKSGCFEIE GVSDEEHFNK TCHAMQVAGI 360
  361 TLVEQENVFR ILSAILLIGN FEFENIAGSN DDSCQLIDRD PLEKVSVLLG CAQPDELLNS 420
  421 MLTRKVVTGK ESYISHNTKE RAENARDSLS MFLYGMMFDW LVVKINSSMS ISTQQKSKSF 480
  481 IGVLDIYGFE SFEVNGFEQF CINYANEKLQ QLFNQHVFKE EQQEYIKEKI DWSYIDFNDN 540
  541 QDTLDLIEKK PICILTLLDE ETMFPKATPQ TLATKLYSKM TSHSKFEKPR FSSTAFTINH 600
  601 YAGKVTYETD QFLDKNKDFI IPEQISILQR SNFSFIKVLM SHSDKFTQSP GGHPQGNGGP 660
  661 TSSNTKGTSG SSSMKFLSVG SQFSTSLATL MKTISTTTPH YVRCIKPNPE KLPQTFNKQD 720
  721 VIHQLRCGGV MESVRICCAG FPTRRLLSEF YQRYKILYVK DINTGSGGGK KGSNNNKIKD 780
  781 PKILVQNLLT GIELSDDKYK IGLTKVFLRA GQLASLEDMR LEQLDRSATV IQKRWKGYLY 840
  841 RKRYKQLRDA SLIIQTKLRS VHAKQQLSAL QRTHSAILIQ KVWRAHRDRV QYQKIRDASL 900
  901 QLQTVMRRHL FSEQVHRERC ENAAIILQTK IRQILSKREV DKKLRGIILI QARWRMKLAK 960
  961 RVYIQLRAEA RSLRTVQEQK NKLQEKLEEL QWRLTSEAKR KQQLEDQKVK SDTTISELSS1020
 1021 NNDHLELQLS EIQLKYQELD KSNQSSQLQL SECLSKLEEQ TQQLDHSSKL NKKLEKDLSD1080
 1081 QHDSIEKLQS QFNETEQQLQ QFKQQSEELS SKLSKTTQQL DFNKQEFDRL SQERDTDNTN1140
 1141 NQLEIQQLKK ANSTLEEDYF SLSGIRDNLE RQVLELRDEN QLIKERLDSL GQQSSQFQSG1200
 1201 AALEKQQLEQ LVQEQSEQLI KLSSEKLGSE EEAKKQINQL ELELTDHKSK LQIQLQLTEQ1260
 1261 SNEKIKKLKG KLEEYQDEKK QLQQELERIK QSKQSVEDEK NSLITQLTTV KFESTQVSTN1320
 1321 VSHQKEKITT LKSTIEELNK SIGKLQAEQK NKDDEIRKIQ FELNDQKQQF TRQTKEFSDL1380
 1381 QSQQSIDRQK SEITIHSLER TNETLKSDFE RVQQSLKQQE RDCQQYKDTI NRLENEVKQL1440
 1441 TQLKERFENE FFVAKEQNSN QTQESVYLKE VTTQMQQNQS RIERELEEKK QHITRIDDER1500
 1501 DELKKQLTQL QQQHEQSSTQ LLLAQNELER LRKKELKYKE RGHETSKQQD QFNMEIQSLR1560
 1561 ITNNDQLKSL QDYEQEKKKL KDKLSSSKQE AQQQRESIIK MDAELSAIKQ HSQWVENSFT1620
 1621 DMKQRNQELI ESSALYKQQL LQQTSTIDST IKEKENEISK LQQQLETSNQ QLHQLKEELN1680
 1681 SMKQSNQLES TEQSKQLNQL IQENQQLKSV TNEISKQLDD AVFENQKINN TIKEQEIKSK1740
 1741 RMSVELQQHI DEGKQQEIQQ LQSTIAQLKQ QQQSETDRLE KEIQQMKRER ETQMKLVEST1800
 1801 KLNYHMLEDR MELYRNVMEI IDYKETEWEK LARLAGCKEL DTKLLSDFLL SCKLEHTSLG1860
 1861 SQMWFHQIDY WCPYERDSSK GIFYGIIRSI VDFTIKNFDD VDLLSYLLAC CSLTLFLYKK1920
 1921 NLVKHLNGAN SIMPIIPTLG DLEELNERLS HQSLTTSGKF SGGGGGGGID FIDQLQQSTG1980
 1981 ITFGLIFKAT TLKLSPLVDG AILNENYNKK LTSISASSFG SGSFGLGSNG VGSVLSIELI2040
 2041 TTYLSSIITI FQHRMVHFTL SQRFFNQVFC WIGALIMKGF MLRQTFCTET FATFVKTKID2100
 2101 FLTRWADDIG NVWVGDVANA FQQVREVINV LNIKDKEKII DDKIRKQYCP TLNSNQLKQV2160
 2161 LSLFSPGEFG GKRVSAKVIA SICPPNKSSA GQSFVQDENK LNTIPIDSLH YLEIQDIKTL2220
 2221 SLPLSIRQTI ETEIINLKQQ IACKK

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