YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11559840
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHQEQQQQH LHCRRKVTAT TTARLVIFSS PLLLLLLTTH LPSTLQADNS PAPQVAALAA  60
   61 PNPAGGVAGS SIIDQFSPNC SAVTHIFQAR GIDAIEIPQK PSNERVLRYC ESPSVGTCCT 120
  121 YNMETRMAMQ SRQQLEGHTK DQISRMSGIL GSKATKFKDI FTALLKESRT QFNSMFIRTY 180
  181 GVIYERNSYV FSDLFKELET YFANGRVDLL EVMDKFFNTL YQKMFTVLNT QYTFDENYMR 240
  241 CVSEHMKELK PFGDVPDKLS VQIKRSFVAT RTYGQALTTA SEVAKKVLNV RLNADCTGAL 300
  301 TKMQHCGACK GYTEKPCTNY CVNVIKGCLH YQHEFDSEWE NFAMAMDKVA ERLLGSFNIV 360
  361 MVVEPLNIKI SEAIMNFQDS GQDITNRVFQ GCGRPKLKKM KRSISPKLQG VQILNARSPV 420
  421 EADTLDIDET LDEAIVLRER RAAEPGSQET SSQQSQEQGV GKSGNGGGGG GGNNRRQQQR 480
  481 RKQQQQRRKQ QNNRDDNDDD DNESGGGREP ILDRIVRDIR QRVKDYKKFW SNLPHSVCSN 540
  541 EDIASSSDVD GMCWNGHTID RYMHSITTEH GSNPEFTGNP ASTKQTAQMA SQLSHLKNAI 600
  601 VHLRNAYNGQ DVEWSEQEEL PYAGSGAGSG SGSEDDEDDD EGSGLGPFEP SHKPDVERPS 660
  661 VDADNDDDED AGGRGHMPTH TSRPTSGVDD KNPLIHTTHF DQDHNDLDED HRQLDEDEDT 720
  721 DAGHDGANDN RSSDAPEKMT LRRALVVYLL PLYMAWFGGV CADLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle