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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39976873, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMLASKSPF PAPLATSGSG MMAGTAQASY PPSRRAPAVP PASQSFSPTE SEFSDSDDHD  60
   61 SPKHWDEDKV CEYLRSVRCG EYEKLFRKNH INGENLLEMD KDVLKEMGIE KVGDRVRLFL 120
  121 SIKKLRTKAI AGQKKRNRDS FAGHESMYTP VSESPSKPFH SSSRVMPNPS VNKRYSRQID 180
  181 LSGMAYDPSR PTTSSRPTSP LPSADFRTAR TRNPYVGQQP TPTGSLRGLG SPPDSQANSR 240
  241 PVLTHTRTDS GMDGSLMAAL PQNQDVIRVI STGGVTKVVK IADCNTCEEV MRVTLRKFAL 300
  301 REDHERNYCF WVLSGLDPDP KQCRRLGDTE LWRVIKDQKR PERNRLILRR VPAGEPGQSE 360
  361 LERAAAIAME EAQQSHSRAM DNVGARSQIK VQKVLGENWD NLQPPLSPVL YQDRERNVYN 420
  421 AARDLERPEP LDSGRLQPRR KVLRSFGGLR PPSELIASDL TTYFPDHPRE DIDRTARLSM 480
  481 RRSARLSKVN SRLSVASSFS MASSIQDAPP IPTIADSWLQ STPLPKARPR DLQSRLQHGY 540
  541 RDSVASSMLD TLQEEGSPIE PNRKSYVSFA DSGSDSAAVS VTDPDGNIVR HSYFDEGSTI 600
  601 GSGSGSGSFG DVSKALNEDG EDADEDLQSF LSGESWDDSK WMKGALIGQG SFGCVYLALH 660
  661 AITGELLAVK QVEAPSPGAN SQNDARKKSM IEALKREISL LRDLRHPNIV QYLGCGSSAE 720
  721 YLNIFLEYVP GGSVQTMLNS YGALPEPLVR SFVRQILNGL SYLHEREIIH RDIKGANILV 780
  781 DNKGTIKISD FGISKKIEAT NLLNGANNNK HRPSLQGSVF WMAPEVVKQT SYTRKADIWS 840
  841 LGCLVVEMMT GTHPFPDCTQ LQAIFKIGGG KATPTIPEDA STEAKAFLAQ TFEMDHNKRP 900
  901 SADDLMLSPF LTPIT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle