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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SEY1_MAGO7
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGNFAAVGS EPTDAQFEHG IQVIDEDKQY NGLVNDYLRR THVAEAGFNY HLISVFGSQS  60
   61 TGKSTLLNNL FGTEFSVMSE SERRQTTKGI WMSKNKREGK MAENILVMDV EGTDGRERGE 120
  121 DQDFERKSAL FALATSEVLI VNIWEHQVGL YQGANMGLLK TVFEVNLQLF LKDKQSSPRS 180
  181 LLFFVIRDHI GNTPLSNLRN TLVQDLTKIW SSISKPPALE NAKIEDYFDF AFAALPHKIL 240
  241 QPEKFVTEVE NLGTRFVAGH RSTQDQEFVG GVFLPEYHRR IPADGFSIYA EGIWDQIVNN 300
  301 KDLDLPTQQE LLAQFRCDEI SRDVLNAFDE AITPLEDKQA EASRLGKPFV LPDLGDTARS 360
  361 ARSKAVEAFK VQASRYHKGV YTRKQAELEG KMDSRLKALY QGQLAAAHKA GVAAFSDAVT 420
  421 GAVKAGQKSG GSYEFAEIVD KQKRKTLDIF AKEAQGLEIE GLAWTNFKPQ FLLFEKELDE 480
  481 VSARLRKDEM RRLATRVERW VKSRLGDSIG LEFNKLGSGR GGSGAPETGE KPATEKDLWD 540
  541 RIWTVFVAVV KEAQERFAER AKSFEASSEE VEIGLWRLRR KSWVALRERI DEEVMEGNIL 600
  601 LKLRENFEDK FRYDEAGVPR IWRPTDDIEG IYTRARESTL TLIPLLSRFR LAETYASPDL 660
  661 PGWIGNQPPG VEPDDEEDLT PIGGIDEEEG KSLEEEMTVL SESKRQDLVV RFKKTADGVY 720
  721 VEAKRGALGG MTQVPLYFWI ALFAFGWNEI WMVIRNPFLF ILLLLSAGGT YVAYNLSLLG 780
  781 PMMQMTNAAA NQASEIGKQK LREFLENNET ARQALAMPAS SKSSGGEQVR MDTLDSKGKK 840
  841 KDYDDDGI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle