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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11228711
Protein type: Transmembrane
Type Confidence: 0.49
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNRRASGAT HCKTTNNCNI SNNSNKMTNC QSSVFIVVGT LFSILAAAQS APVSTTTQAE  60
   61 IYLSQFGYLP ASARNPASSG LHDQRTWVSA IEEFQSFAGL NITGELDAET MKLMSLPRCG 120
  121 VRDRVGTGDS RSKRYALQGS RWRVKNLTYK ISKYPKRLKR VDVDAEIGRA FAVWSEDTDL 180
  181 TFTRKTSGPV HIEIKFVESE HGDGDAFDGQ GGTLAHAFFP VFGGDAHFDD AELWTIGSPR 240
  241 GTNLFQVAAH EFGHSLGLSH SDQSSALMAP FYRGFEPVFK LDEDDKAAIQ SLYGRKTNQL 300
  301 RPTNVYPATT QRPYSPPKVP LDDSICKDSK VDTLFNSAQG ETYAFKGDKY YKLTTDSVEE 360
  361 GYPQLISKGW PGLPGNIDAA FTYKNGKTYF FKGTQYWRYQ GRQMDGVYPK EISEGFTGIP 420
  421 DHLDAAMVWG GNGKIYFFKG SKFWRFDPAK RPPVKASYPK PISNWEGVPN NLDAALKYTN 480
  481 GYTYFFKGDK YYRFHDARFA VDSATPPFPR PTAHWWFGCK NTPSSTGNIV EGSDNEFEQH 540
  541 SMIPHADDGN GDDFDAGEWD RLSGSFV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle