YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38105197, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQRPTRTAV TTGVLLSPTA PTPRAMVTSS TTAVRRPSLP SRHAITNETI GDAYVSFIFY  60
   61 CNPAVPPSTD SSALKEAFWL PPKSEGKTFS TFTLYELIGK LNQRDEVKTW GDLALRLGVE 120
  121 RPKAEKQQSA QKIQQYAVRL KRWMKSMHVD AFFNYLYGEE NEYFTDIPPE GTPITDVSRD 180
  181 GVAPEDDMAL RALLPHIRPR RGRRARDDDE SGESPAKVAR IEMDDCPPTA GRTDAIHDPW 240
  241 SALPGSLGGD LRNVPGASNQ AWTIDPPPLS AHPRSAITPS TKAQFWADEP KSAITPSRTG 300
  301 STGHKRHGPK VVSSAWKSGQ GTSGKTRGRP PNSRMSNNEG ASAYPMDTPI SAAPNWPTSN 360
  361 NTTDLGWGRG DLPSTHDMLQ SKSSQTPPAH EATPPTLPAL NTALSIQDLQ QQPYPQPDLQ 420
  421 SSSRPLEKPK GLSLHVPERV GNEVRLATPP PPTVTVNGQS PAPPVQGPKL SGPEFPQAPS 480
  481 VRLTPEVTSS IPPPDPSTTE DDKPKVCFKD PSNRTNMDEL EGFFAHEIMT GIWRDKDGNR 540
  541 IPSCSVDEAF AIVRKVIQSL LDAAITEVGF MLNVSALAGG KVLMTTSSLQ ITVVEEREEE 600
  601 TLYSCKWLLQ LGDLKGDFEM QETVRHDTWR KPADLRRNGA SGAEVSVPKA SRSEDSKVMT 660
  661 ASESQGTSGG TAPKPRTNSG SSAEVSGTES ADYWKEKYRE VAEMYKRKDK ELARMQSAVM 720
  721 KALQDPRADR L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle