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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39943728, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVDEKSVG LGRSPSDSDM ADGQVVGVDR DADVVAKYGE TQRGLSPRHV QLMAIGGSIG  60
   61 TGLWVGIGGV LSKAGPLSVL LGYAFWGLLY IWPLNLCVAE MCAYLPIRGT IFELARRFVD 120
  121 PALGFAMGWT YFFAGLMLVC TEYAAVATIM QYWSKDINPA VWIAMAMVLC IMLNVVAVKW 180
  181 YGESEFIMAS TKVILLFGLI ILTIVTMAGG NPQHDVYGFR NWGDGNYIHP YLAQGDTGRF 240
  241 LGWWKVVIYA AFTIAGPDMI ALAAGEIVNP RRTIPRVAKL IFYRLVGFYF IGVLCVGIIC 300
  301 SSRDPRLMGA LADGASGAAA SPWVIGIENL GIRVLPHIIN AAIMLSGWSC GNAYLYSASR 360
  361 TLYGLARDNQ APQFLLYCTK QGVPLYCVLT VSLISCITFL VSSNSAVEVF FWFVDLTTTA 420
  421 LIMTYTMMMI TFIGFYRARK AQGMDPQTLP FLAPFTPYSA YLALFLGCVA VLFVGFDALG 480
  481 PFDVRSFITA YFALGFGAFM YVFWKVVKRT KLVDPREADL YSGKKEVDDE CRHWEEGGIE 540
  541 EVERARLAQM SFARRCWERL CLVHPSLDMR RPDIRPNHLP EPVDPPRARP VNPHHLDAAG 600
  601 PGTNNIKRVR RDQPHIIDTD RTVASAPTAA APARRGLGDE VVVDGAGGLE GAHGLDAERR 660
  661 LLKDGRVARQ RGRAGDARAH GGRGAVAEDE AAHVAAALAP LRLELPQALL HVAVDGQRVV 720
  721 AALQRGHGLR AQGHAGLGGG MLEGRFGDVG KGAVYSWKKE NEGGVGVGFL RTTAVEQMED 780
  781 DTDSTANHNI DIFRDCVSAV LVERLSQQTE TKTKKKRSSK RNSRRKSTTH QPDPDVAGAG 840
  841 SAETVTTTTA PPPQAQNDDA EELSEFIGYV ADTTFDLLPP ELRLLTNRSW TEDPSLADRY 900
  901 SLPLTGPSLT AVLPTAVDPD VSTALSAYGD PEDLLAPVVT AYITTATAAP VKVTRGQADE 960
  961 CELCGRDWIH LTYHHLIPRM VHDKVLKRGW HREDELQNVA WLCRACHNTV HRFASHEDLA1020
 1021 RYYYTVDLLM AQDEIAAFAQ WVGRLRWKGR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle