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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39973679, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRCSRTTSL HPNSRSTSLA RFSSLAAARH TLNLQSSSND SSAIRLQTEP AAATAATHPG  60
   61 RYRLPSLTCS PDPRATLRGP QNPLALVSRH HLHHLPRTSS SSRGQFSQKR DFATSSSKPS 120
  121 SDMAAIKIDG TAIAKKIRER LHAEIDEKQA VNPHYKPCLN IIQVGDRSDS STYVRMKLKA 180
  181 AEEAGIQCEL LHYPETISEA ELLNQLHRIN NDPNIHGVLV QLPLPKHLDE YAVTSAVADE 240
  241 KDVDGFGATN IGELAKKGGR PYFIPCTPKG IMVLLEEAGV DLKGKNAVVL GRSDIVGSPV 300
  301 SYLLKNADAT VTVCHSRTVG LQDHLKAADI VVAAIGKAGF VKGEWLKPGA VVIDVGTNYI 360
  361 PDASKKSGQR LVGDVDFESA AQVASHITPV PGGVGPMTVA MLLQNVVDSA TMHTQRQKNR 420
  421 KTVPLPLKLL DPVPSDIAIS RAQVPKQIVR VAEEVGIGAS ELEPYGAYKA KVDLSLLDRL 480
  481 KHRRNGRYVV VTGITPTPLG EGKSTTTMGI AQALGGHLGR PTFANVRQPS QGPTFGIKGG 540
  541 AAGGGYSQVI PMDEFNLHLT GDIHAITAAN NLLAAAIDTR IFHENTSKDA GLFKRLVPVK 600
  601 NGKREFAPIM FRRLKKLGIT KTDPAELTEE EISRFVRLDI DPETITWRRV LDVNDRHLRG 660
  661 ITIGTAPTEK GQTRESGFDI SVASECMAIL ALSTSLADMR ERLGSMVVAT SRSGDPVTCD 720
  721 DIGAGGALTA LMRDAIKPNL MQTLEGTPVF VHAGPFANIS IGNSSILADK IALKLVGTEP 780
  781 DEDHSANTGF VVTEAGFDFT MGGERFFNIK CRTSGLVPDV VVIVATVRAI KVHGGGPPIT 840
  841 PGAPLSPVYK EENVETLRAG CTNLRKQIEN AKQYGVPVVV AINKFSTDTD AEVAVVREES 900
  901 LAAGAVDAVL SNHWAEGGKG AIDLAQAVIA ASDLPKPDFK LLYSLEGTVQ ERIEKIAKDM 960
  961 YGAAAVEFSE LAQKKVETYT RQGFGNLPIC IAKTQYSTSH DPELKGAPKG FTVPIRDVRM1020
 1021 AAGAGYLYAL AADIQTIPGL PTAPGYLNVD VDLETGEIDG LF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle