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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1054877
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMEKKVHYKM HKVKKNWVAI AVTSLALLVA PKALGLESGV IYADDANQVT NVKEQSAVQS  60
   61 KDSEQTTSDK ATDSSQLEVK EQASSSKETY QASAATNPTA NEQTTQQDKE VETSRTDSRH 120
  121 ELTQKTSDDS SEKSGSSQEP KVADQAESTD KTQAALQAKQ DSRANDQEET TENVAKATVS 180
  181 DKIIATPKKE RLPEPAQRKE SITEKMLAAQ AQAAPVNTEH DDDVLAHIKT IDGKKYYVQD 240
  241 DGTVKKNFAV ELNGKILYFD AETGALVDSN EYQFQQGTSS LNNEFTQKNA FYGTTDKDIE 300
  301 TVDGYLTADS WYRPKFILKD GKTWTASTET DLRPLLMAWW PDKRTQINYL NYMNQENLGI 360
  361 GAFESKTEQV LLTNAVQQVQ RKIEERISKE GDTKWLRTLM SAFVKTQPNW NIKTESETTG 420
  421 TNKDHLQGGA LLYTNSDKTS HANSRYRLLN RTPTSQTGTP KYFIDKSNGG YEFLLANDFD 480
  481 NSNPAVQAEQ LNWLHYMMNF GSIVANDPTA NFDGVRVDAV DNVNADLLQI ASDYFKSRYK 540
  541 VGESEEEALK HLSILEAWSD NDPDYNKDTK GAQLAIDNKL RLSLLYSFMR KLSIRSGVEP 600
  601 TITNSLNDRS TENKNGERTA NYIFVRAHDS EVQTVIADII RENINPNTDG LTFTMDELKQ 660
  661 AFKIYNEDMR KADKKYTQFN IPTAHALMLS NKDSITRVYY GDLYTDDGQY MEKKSPYHDA 720
  721 IDALLRARIK YVAGGQDMKV TYMGVPREAD KWSYNGILTS VRYGTGANEA TDEGTAETRT 780
  781 QGMAVIASNN PNLKLNEWDK LQVNMGAAHK NQYYRPVLLT TKDGISRYLT DEEVPQSLWK 840
  841 KTDANGILTF DMNDIAGYSN VQVSGYLAVW VPVGAKENQD ARVTASKKKN ASGQVYESSP 900
  901 ALDSQLIYEG FSNFQDFATR DDQYTNKVIA KNVNLFKEWG VTSFELPPQY VSSQDGTFLD 960
  961 SIIQNGYAFE DRYDMAMSKN NKYGSLDDLL NALRALHSVN IQAIADWVPD QIYNLPGKEV1020
 1021 VTATRVNNYG TYREGAEIKE KLYVANSKTN GTDYQGKYGG AFLDELKAKY PEIFERVQIS1080
 1081 NGQKMTTDEK ITKWSAKYFN GTNILGRGAY YVLKDWGSKE YLSNKNGETA LPKQLVNKEA1140
 1141 STGFVKDTNG FKFYSTSGNQ AKDTFIQDEN GNWYYFDNQG YLVTGAREID GKQLYFMKNG1200
 1201 VQLRDALQED ENGNQYYYDK TGAKVLNRYY TSDGQNWRYF DAKGVMARGL VKIGDGQQYF1260
 1261 DQNGYQVKGK VVRAKDGKLR YFDKDSGNAV INRFAQGDNP SDWYYFGADG VALTGLQKIG1320
 1321 QQTLYFGQDG KQVKGQVVML ADKSIRYFDA NSGEMAVNKF AEGAKNEWYY FDQDGKAVTG1380
 1381 LKTINNQVLY FDQDGKQVKG QVVTLADKSI RYFDANSGEM AVNKFAEGAK NEWYYFDQDG1440
 1441 KAVTGLQTIN KQVLYFGQDG KQVKGQVVTL ADKSIRYFDA NSGEMAVNKF AEGAKNEWYY1500
 1501 FDQDGKAVTG LKTINNQVLY FGQDGKQVKG QVVYVDGAER YFDPKSGDMV RNKWIRLEDG1560
 1561 TWMYFDRNGR GRRFGRN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle