YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|559543
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKMLLIFSF FLISLNGFPL NSREVDKEKL KDFVNMDLEF VNYKGPYDST NTYEQIVGIG  60
   61 EFLARPLINS NSNSIYYGKY FINRFIDDQD KKASVDVFSI GSRSQLDSIL NLRRILTGYL 120
  121 IKSFDYERSS AELIAKVITI HNAVYRGDLN YYKEVYIEAA LKSLTKENAG LSRVYSQWAG 180
  181 KTQIFIPLKK NILSGKVESD IDIDSLVTDK VVAALLSENE AGVNFARDIT DIQGETHKAD 240
  241 QDKIDIELDN VHKSDSNITE TIENLRDQLE KATDEEHRKE IESQVDAKKK QKEELDKKAI 300
  301 DLDKAQQKLD SSEDNLDIQR DTVREKIQED IDEINKEKNL PKPGDVSSPK VDKQLQIKES 360
  361 LEDLQEQLKE TSDENQKREI EKQIEIKKSD EELLKSKDPK ALDLNGDLNS KVSSKEKIKG 420
  421 KEGEIVKEES KASLADLNND ENLMRPEDQK LSEDKKLDSK KNLKPVSEIE RVNEISKSNN 480
  481 NEISESSPLY KPSYSDMDSK EGIDNKDVNL QETKSQTKSQ PTSLNQDLTT MSIDSSNPVF 540
  541 LEVIDPITNL GTLQLIDLNT GVRLKESTQQ GIQRYGVYER EKDLVVIKMD SGKAKLQILN 600
  601 KLENLKVISE SNFEINKNSS LYVDSKMILV GVKDSGNVWR LAKFSPKNLN EFILSENKIL 660
  661 PFTSFSVRKN FIYLQDEFKS LITLDLNTLK KVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle