YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|11066123
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRRMMARAS SRLAAPSAQG ISSASPSLSS TTTTMCWSSS TAALPPAPSA AEQHPCPLRL  60
   61 ASGSGHSTAH CRQFTYQKET MLNELSIENW IMPTLYAGHF NRVVWLKNSW CQQLPTGRHD 120
  121 FKVGQKDDRI GVDCPLDYFI ADGNYCTTED LQDAKSVELQ VHDADNESLN PNEFLTEKDA 180
  181 KGFVLDIDLD FFSTSNPFLE IYKDADCYNQ LKEIFHFESV EKVKKSGTAT IADYLATAER 240
  241 RQTQLDALKT IFWHLEEERN FEGLEKPDET VVTPEVYAKI VKLADQLQEK YPDDEIDWHL 300
  301 IFDSGSTTDN NGLPHHISIA EELETYFANF KRFLQRLPVP PVAITMAHSA QDDYCPQDQV 360
  361 AFIEECVLRL LKEVFGERLH DKAILHYMDD PWDVMKL

Type	Start	End	Confidence
Signal Peptide	1	42	0.86
N-region	1	33
H-region	34	39
C-region	40	42
Cleavage Site	42	43
Non-Cytoplasmic	43	397	0.99