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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|10952736
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLQFLLLSL CVSVATAKVI TGIFDSFNSL TWTNAASYSY RGPANPTWTA VIGWSLDGAT  60
   61 ASAGDTFTLD MPCVFKFITD QTSIDLVADG RTYATCNLNS AEEFTTFSSV SCTVTTTMTA 120
  121 DTKAIGTVTL PFSFSVGGSG SDVDLANSQC FTAGINTVTF NDGDTSISAT VDFEKSTVAS 180
  181 SDRILLSRIL PSLSQAVSLF LPQECANGYT SGTMGFSTAG TGATIDCSTV HVGISNGLND 240
  241 WNYPISSESF SYTKTCTSTS VLVTYQNVPA GYRPFVDAYV SATRVSSYAM RYTNIYACVG 300
  301 AASVDDSFTH TWSGYSNSQA GSNGITIVVT TRTVTDSTTA VTTLPFNSES DKTKTIEILQ 360
  361 PIPTTTITTS YVGVTTSYST KTAPIGETAT VIVDVPYHTT TTVTSEWTGT ITTTTTRTNP 420
  421 TDSIDTVVVQ VPSPNPTVTT TEYWSQSYAT TTTVTAPPGG TDSVIIREPP NPTVTTTEYW 480
  481 SQSFATTTTV TAPPGGTDSV IIREPPNPTV TTTEYWSQSF ATTTTVTAPP GGTDSVIIRE 540
  541 PPNPTVTTTE YWSQSYATTT TVTAPPGGTD SVIIREPPNP TVTTTEYWSQ SFATTTTVTA 600
  601 PPGGTDSVII REPPNPTVTT TEYWSQSFAT TTTVTAPPGG TDSVIIREPP NPTVTTTEYW 660
  661 SQSYATTTTV TAPPGGTDSV IIREPPNPTV TTTEYWSQSY ATTTTVTAPP GGTDSVIIRE 720
  721 PPNPTVTTTE YWSQSYVTTS TITAPPGGTD TVIIREPPNY TVTTTEYWSQ SYATTTTVTA 780
  781 PPGGTDSVII REPPNPTVTT TEYWSQSYAT TTTVTAPPGG TDTVIIREPP NYTVTTTEYW 840
  841 SQSYATTTTV TAPPGGTDTV IIREPPSPTV TTTEYWSQSY ATTTTVTAPP GGTDTVIIRE 900
  901 PPNPTVTTTE YWSQSYATTT TVTSPPGGTD IVIIREPPNP TVTTTEYWSQ SYATTTTVTA 960
  961 PPGGTDSVII REPPNPTVTT TEYWSQSYAT TTTVTAPPGG TDSVIIREPP NPTVTTTEYW1020
 1021 SQSYATTTTV TAPPGGTDSV IIREPPNPTV TTTEYWSQSF ATTTTVTAPP GGTDSVIIRE1080
 1081 PPNPTVTTTE YWSQSYATTT TVTAPPGGTD TVIIREPPNP TVTTTEYWSQ SYATTLTITA1140
 1141 PPGGTNSVII RVHSSTNDES SESTFSTLSV PSFSGSISIV STVSRPHYVN STVTHLPSSS1200
 1201 SKPVDIPSSD VVPSTNDNSL TSLTGSENGE TSVAISTTFC DDENGCQTSI PQGSVVRTTA1260
 1261 PTTATPTPII GDNNGSGKSK SGELSSTGSV TTNTATPDVP STKVPSNPGA PGTGVPPPLA1320
 1321 PSTETQTTNN VPGSPNIPAT GTTDIIREST TVSHTVTGNG NTGVPMNPNP ALTTSTSLTG1380
 1381 ATNSATNPSH ETGVNTGSRG STNIVTPPSS ATATVVIPGT DNGATTKGQD TAGGNSNGFT1440
 1441 ATTNTQGGNN EPGNQPGTNT TGEPVGTTGT QSVESTSQPT TLSQQTTSSL ISTPLASTFD1500
 1501 GSGSIVQHSG WLYVLLTAIS IFF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle