YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|10880460
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADLLSCLALP ILFTSIVKHN HWPFGDQACI VLPSLILLNM YSSILLLATI SADRFLLVFK  60
   61 PIWCQKFRRP GLAWMACGVT WVLALLLTIP SFVFRRIHKD PYSDSILCNI DYSKGPFFIE 120
  121 KAIAILRLMV GFVLPLLTLN ICYTFLLIRT WSRKATRSTK TLKVVMAVVT CFFVFWLPYQ 180
  181 VTGVILAWLP RSSSTFQSVE RLNSLCVSLA YINCCVNPIV

Type	Start	End	Confidence
Non-Cytoplasmic	1	28	0.87
Transmembrane Helix	29	51	0.87
Cytoplasmic	52	70	0.89
Transmembrane Helix	71	93	0.92
Non-Cytoplasmic	94	122	0.97
Transmembrane Helix	123	147	0.89
Cytoplasmic	148	163	0.90
Transmembrane Helix	164	188	0.87
Non-Cytoplasmic	189	220	0.96