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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1839579
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADPNPARTF ADPEDPIIAA TVPDHYTPLL DVDPPAGENS RRPLKGFLVI LSGLVLVGLL  60
   61 MALISENGPS VSQDSQQNDL TLNAPAESTN ISAQFLEPAS RGPSTGVSEK SFRLHSGVRA 120
  121 PFPWSNTMLT WQRTGYHFQP EKNWMNDPNG PMFYGGWYHF FYQYNPDAAV WGNIVWGHAV 180
  181 SKDLIEWLHL PLAMVADQWY DTNGVWTGSA TLLSDGQVIM LYTGATNESV QVQNLAYPAD 240
  241 LSDPLLVDWV KYPGNPVLVP PPGIDDKDFR DPTTAWYWPD GKWRIAIGSK VNKTGISLVY 300
  301 NTEDFKKYEL IEGVLHAVPG TGMWECVDLY PVSLKEDNGL DTSFNGPGVK HVLKASLDDD 360
  361 KNDYYAIGTY SLESGNWTPD NPNLDVGIGL RYDYGKFYAS KTFYDQNKQR RILWGWIGET 420
  421 DGESADIKKG WASVQSIPRT VVFDKKTGTN ILQWPVAEIK SLRKSSKKFD KLEVGPGSVV 480
  481 TLEVEKATQM DITAEFEIDK EALKRIGESD VEYSCRTSGG SAQRGELGPF GLLLLADEGR 540
  541 CEQTPVYFYV AKGTDGQLKT FFCTDESRSS LANDVDKRIF GSTVPVIKGE KLSMRILVDH 600
  601 SIIESFAQGG RTCITSRVYP TKAIYGAAQL YVFNNATSAS ITASIQTWAM KSAYIRPYSS 660
  661 HQES

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle