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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30682152
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIHLGEIGI VLFPWFLWLS LFLSCGYAAI TISSPLTLGQ TLSSPGGFYE LGFFSPNNSQ  60
   61 NQYVGIWFKK ITPRVVVWVA NREKPITTPV ANLTISRNGS LILLDSSKNV VWSTRRPSIS 120
  121 NKCHAKLLDT GNLVIVDDVS ENLLWQSFEN PGDTMLPYSS LMYNLATGEK RVLSSWKSHT 180
  181 DPSPGDFVVR LTPQVPAQIV TMRGSSVYKR SGPWAKTGFT GVPLMDESYT SPFSLSQDVG 240
  241 NGTGLFSYLQ RSSELTRVII TSEGYLKTFR YNGTGWVLDF ITPANLCDLY GACGPFGLCV 300
  301 TSNPTKCKCM KGFVPKYKEE WKRGNMTSGC MRRTELSCQA NLSTKTQGKG VDVFYRLANV 360
  361 KPPDLYEYAS FVDADQCHQG CLSNCSCSAF AYITGIGCLL WNHELIDTIR YSVGGEFLSI 420
  421 RLASSELAGS RRTKIIVGSI SLSIFVILAF GSYKYWRYRA KQNDSWKNGL EPQEISGLTF 480
  481 FEMNTIRAAT NNFNVSNKLG QGGFGPVYKG TLSDKKDIAV KRLSSSSGQG TEEFMNEIKL 540
  541 ISKLQHRNLV RLLGCCIDGE EKLLIYEFLV NKSLDTFLFD LTLKLQIDWP KRFNIIQGVS 600
  601 RGLLYLHRDS CMRVIHRDLK VSNILLDDKM NPKISDFGLA RMFQGTQHQD NTRKVVGTLG 660
  661 YMSPEYAWTG MFSEKSDIYA FGVLLLEIIS GKKISSFCCG EEGKTLLGHA WECWLETGGV 720
  721 DLLDEDISSS CSPVEVEVAR CVQIGLLCIQ QQAVDRPNIA QVVTMMTSAT DLPRPKQPLF 780
  781 ALQIQDQESV VSVSKSVNHV TQTEIYGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle