YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PUS2_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSISQLPSF SLTTAKSLRY PSSPSSSLSI FFSFFPKVSN FVRASSGIPN LVACSPTEII  60
   61 IPRVNNAGLR IEEIVDAAKG KIRLDSWISS RINGVSRARV QSSIRLGLVT VNGRVVDKVS 120
  121 HNVKSGDEVN CTISELQPLK AEAEDIPLDI VYEDKHVLVV NKPAHMVVHP APGNPTGTLV 180
  181 NGILHHCSLP CVDYSNSEED DDSDEETFSD DEEMTTSPSS YAASVRPGIV HRLDKGTTGL 240
  241 LVVAKDEHSH AHLAEQFKLH TIERVYVSLT TGVPSPPQGR IEIPIGRDSS NRIRMAAIPG 300
  301 GVRGGRARHA ASRYKVIETF AGGGSALVEW RLETGRTHQI RAHAKYMGVP LLGDEVYGGT 360
  361 KSMALSLLQK RVSRSDQEEI IELISRMDRP CLHAIVLGFT HPCTGEIVKF SCPPPSDLAE 420
  421 IVGLLRRSGL

Type	Start	End	Confidence
Signal Peptide	1	44	0.58
N-region	1	35
H-region	36	41
C-region	42	44
Cleavage Site	44	45
Non-Cytoplasmic	45	430	0.99