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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP32_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNISNVSIA LYLCTLFAFV SSDSPEAMRD LVTNFPGQPK VSFRHYAGYV TVNIISGRAL  60
   61 FYWFFEAMTH PNVKPLVLWL NGGPGCSSVG YGATQEIGPF LVDNKGNSLK FNPYAWNKEA 120
  121 NILFLESPAG VGFSYSNTSS DYRKLGDDFT ARDSYTFLQK WFLRFPAYKE KDFFIAGESY 180
  181 AGKYVPELAE VIYDKNKDNE NLSLHINLKG ILLGNPLTSY AEDWTGWVDY AWNHAVVSDE 240
  241 TYRVIKQSCN FSSDTTWDVK DCKEGVDEIL KQYKEIDQFS LYTPICMHHS SKVDSYANYK 300
  301 TTIPRLFDGF DPCLDDYAKV FYNRADVQKA LHATDGVHLK NWTICNDDIL NHWNWTDSKR 360
  361 SVLPIYKKLI AGGFRVWVYS GDTDGRVPVL STRYCINKLE LPIKTAWRPW YHETQVSGWF 420
  421 QEYEGLTFAT FRGAGHDVPS FKPSESLAFF SAFLNGVPPP LSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle